RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 LGALS3P17931 250 aaKnown RBP11.71□□□□□ -0.53
SMARCA4-202ENST00000413806 ECSCRQ19T08 205 aa11.71□□□□□ -0.53
SMARCA4-202ENST00000413806 SPANXN1Q5VSR9 72 aa11.71□□□□□ -0.53
SMARCA4-202ENST00000413806 CDCP2Q5VXM1 449 aa11.71□□□□□ -0.53
SMARCA4-202ENST00000413806 MIC13Q5XKP0 118 aa11.71□□□□□ -0.53
SMARCA4-202ENST00000413806 ELOVL5Q9NYP7 299 aa11.71□□□□□ -0.53
SMARCA4-202ENST00000413806 RBFOX2O43251 390 aaKnown RBP eCLIP11.71□□□□□ -0.533e-7■■□□□ 14.3
SMARCA4-202ENST00000413806 LINC00614P0C842 121 aa11.71□□□□□ -0.53
SMARCA4-202ENST00000413806 LCN2P80188 198 aa11.71□□□□□ -0.53
SMARCA4-202ENST00000413806 MAP1LC3AQ9H492 121 aa11.71□□□□□ -0.53
SMARCA4-202ENST00000413806 LOC101059948A0A1B0GTJ6 334 aa11.71□□□□□ -0.54
SMARCA4-202ENST00000413806 SNAI2O43623 268 aa11.71□□□□□ -0.54
SMARCA4-202ENST00000413806 MEF2CQ06413 473 aaPredicted RBP11.71□□□□□ -0.54
SMARCA4-202ENST00000413806 FGF11Q92914 225 aa11.71□□□□□ -0.54
SMARCA4-202ENST00000413806 NKX2-8O15522 239 aa11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 S1PR2O95136 353 aa11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 FNDC4Q9H6D8 234 aaPredicted RBP11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 BEX4Q9NWD9 120 aaPredicted RBP11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 APELAP0DMC3 54 aa11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 PPP1R32Q7Z5V6 425 aa11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 J3KRW8 73 aa11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 SLC25A53Q5H9E4 307 aa11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 hCG_38984A0A1B0GV85 526 aa11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 ZG16O60844 167 aa11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 IGHV3-21A0A0B4J1V1 117 aa11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 SYNGR3O43761 229 aa11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 SMAGPQ0VAQ4 97 aa11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 ZNF146Q15072 292 aa11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 MRPL32Q9BYC8 188 aaKnown RBP11.7□□□□□ -0.54
SMARCA4-202ENST00000413806 A0A0G2JMZ2 1700 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 LRRC37A2A6NM11 1700 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 PRR7Q8TB68 274 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 C5orf30Q96GV9 206 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 TGFBR3LH3BV60 316 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 TIAF1O95411 115 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 C8orf88P0DMB2 117 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 OR4A5Q8NH83 315 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 SPSB4Q96A44 273 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 NEU1Q99519 415 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 HSPB7Q9UBY9 170 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 VENTXO95231 258 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 FAM106CPP0CH98 169 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 TFPI2P48307 235 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 TMEM74BQ9NUR3 256 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 IGFBP3P17936 291 aaPredicted RBP11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 DRAM1Q8N682 238 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 TMEM171Q8WVE6 324 aa11.69□□□□□ -0.54
SMARCA4-202ENST00000413806 TRAV30A0A087WSZ9 112 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 FADS6Q8N9I5 356 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 TNFRSF19Q9NS68 423 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 ZNF646O15015 1829 aaPredicted RBP11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 TMEM186Q96B77 213 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 TCF19Q9Y242 345 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 SRP19P09132 144 aaKnown RBP11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 ARL14EPLP0DKL9 152 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 NUP37Q8NFH4 326 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 OR5A1Q8NGJ0 315 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 IMMP2LQ96T52 175 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 TBX6O95947 436 aaPredicted RBP11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 SP9P0CG40 484 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 CKS1BP61024 79 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 TMEM177Q53S58 311 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 TTC9CQ8N5M4 171 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 NEUROG3Q9Y4Z2 214 aa11.68□□□□□ -0.54
SMARCA4-202ENST00000413806 TYMSP04818 313 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 ZNF703Q9H7S9 590 aaPredicted RBP11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 HILPDAQ9Y5L2 63 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 GPR183P32249 361 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 RPS20P60866 119 aaKnown RBP11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 TM4SF20Q53R12 229 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 OR4D5Q8NGN0 318 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 NEUROG1Q92886 237 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 ZNF414Q96IQ9 312 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 ZNHIT1O43257 154 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 RAMP1O60894 148 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 PSG9Q00887 426 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 OR9G1Q8NH87 305 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 ATG2BQ96BY7 2078 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 C17orf51A8MQB3 221 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 RND2P52198 227 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 Q6ZT83 130 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 PGPA6NDG6 321 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 TMEM250H0YL14 139 aa11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 COLQQ9Y215 455 aaPredicted RBP11.67□□□□□ -0.54
SMARCA4-202ENST00000413806 A0A1W2PRS3 328 aa11.66□□□□□ -0.54
SMARCA4-202ENST00000413806 TMEM78Q5T7P6 136 aa11.66□□□□□ -0.54
SMARCA4-202ENST00000413806 OR4C13Q8NGP0 309 aa11.66□□□□□ -0.54
SMARCA4-202ENST00000413806 TIMP4Q99727 224 aa11.66□□□□□ -0.54
SMARCA4-202ENST00000413806 SPAG8Q99932 426 aaPredicted RBP11.66□□□□□ -0.54
SMARCA4-202ENST00000413806 MRPS18CQ9Y3D5 142 aaKnown RBP11.66□□□□□ -0.54
SMARCA4-202ENST00000413806 SPAG17Q6Q759 2223 aa11.66□□□□□ -0.54
SMARCA4-202ENST00000413806 ZNF883P0CG24 379 aa11.66□□□□□ -0.54
SMARCA4-202ENST00000413806 NUBP1P53384 320 aa11.66□□□□□ -0.54
SMARCA4-202ENST00000413806 TMEM170AQ8WVE7 144 aa11.66□□□□□ -0.54
SMARCA4-202ENST00000413806 C1QTNF5Q9BXJ0 243 aa11.66□□□□□ -0.54
SMARCA4-202ENST00000413806 PRDM13Q9H4Q3 707 aa11.66□□□□□ -0.54
SMARCA4-202ENST00000413806 IL36BQ9NZH7 164 aa11.66□□□□□ -0.54
SMARCA4-202ENST00000413806 WDR90Q96KV7 1748 aa11.66□□□□□ -0.54
SMARCA4-202ENST00000413806 IGKV1D-43A0A0B4J1Z2 117 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms