RNA–Protein interactions for RNA: ENST00000413366.7

PRKCA-202, Transcript of protein kinase C alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCA, Length 8,751 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-202ENST00000413366 FAM222BQ8WU58 562 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 ITLN1Q8WWA0 313 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 C20orf144Q9BQM9 153 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 SEPSECSQ9HD40 501 aaKnown RBP6.54□□□□□ -1.36
PRKCA-202ENST00000413366 DLEC1Q9Y238 1755 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 COL11A1P12107 1806 aaPredicted RBP6.54□□□□□ -1.36
PRKCA-202ENST00000413366 A0A1B0GWB2 263 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 MAS1LP35410 378 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 C1orf162Q8NEQ5 155 aaPredicted RBP6.54□□□□□ -1.36
PRKCA-202ENST00000413366 RGP1Q92546 391 aaPredicted RBP6.54□□□□□ -1.36
PRKCA-202ENST00000413366 EEF1AKMT3Q96AZ1 226 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 PARLQ9H300 379 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 TMEM74BQ9NUR3 256 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 F11RQ9Y624 299 aaKnown RBP6.54□□□□□ -1.36
PRKCA-202ENST00000413366 F5P12259 2224 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 TRBV5-3A0A0A0MS03 114 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 PAGE4O60829 102 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 FCGR3AP08637 254 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 SELLP14151 372 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 SNRPD3P62318 126 aaKnown RBP6.54□□□□□ -1.36
PRKCA-202ENST00000413366 SPANXN1Q5VSR9 72 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 SIGLEC7Q9Y286 467 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 WNK3Q9BYP7 1800 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 hCG_38984A0A1B0GV85 526 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 TMEM8BA6NDV4 472 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 TYMSP04818 313 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 TRBV24-1A0A075B6N3 115 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 CSRP1P21291 193 aaKnown RBP6.54□□□□□ -1.36
PRKCA-202ENST00000413366 GTSCR1Q86UQ5 136 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 GCSAMQ8N6F7 178 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 OR10AG1Q8NH19 301 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 NEU1Q99519 415 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 TUBGCP6Q96RT7 1819 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 DENND4AQ7Z401 1863 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 DYSFO75923 2080 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 IGKV3D-15A0A087WSY6 115 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 IGKV3-15P01624 115 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 PRSS12P56730 875 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 CFHR1Q03591 330 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 NSUN5P1Q3KNT7 163 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 ZNF770Q6IQ21 691 aaPredicted RBP6.54□□□□□ -1.36
PRKCA-202ENST00000413366 HEPN1Q6WQI6 88 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 OR4X1Q8NH49 305 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 C5orf30Q96GV9 206 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 PLXNA1Q9UIW2 1896 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 SIPA1L3O60292 1781 aaPredicted RBP6.54□□□□□ -1.36
PRKCA-202ENST00000413366 MFAP2P55001 183 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 DEFB121Q5J5C9 76 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 SLC6A13Q9NSD5 602 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 ZDBF2Q9HCK1 2354 aa6.54□□□□□ -1.36
PRKCA-202ENST00000413366 A8MWL6 223 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 SYNGR3O43761 229 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 COX6A1P12074 109 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 FAM71F2Q6NXP2 309 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 CBLN3Q6UW01 205 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 FAM57AQ8TBR7 257 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 ATP6V0BQ99437 205 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 A0A1W2PPE3 182 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 FFAR1O14842 300 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 THY1P04216 161 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 ESDP10768 282 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 CDCP2Q5VXM1 449 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 OR1K1Q8NGR3 316 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 ZG16BQ96DA0 208 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 GPR27Q9NS67 375 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 ZXDCQ2QGD7 858 aaPredicted RBP6.53□□□□□ -1.36
PRKCA-202ENST00000413366 DPRXA6NFQ7 191 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 MRPL18Q9H0U6 180 aaKnown RBP6.53□□□□□ -1.36
PRKCA-202ENST00000413366 PEX11BO96011 259 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 TSPOP30536 169 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 SPACA3Q8IXA5 215 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 SCN10AQ9Y5Y9 1956 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 S1PR2O95136 353 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 CKS2P33552 79 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 KIAA0040Q15053 153 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 ZNF385AQ96PM9 386 aaKnown RBP6.53□□□□□ -1.36
PRKCA-202ENST00000413366 MAP1LC3AQ9H492 121 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 PEMTQ9UBM1 199 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 A0A1B0GTL3 188 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 ZNF735P0CB33 412 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 CTLA4P16410 223 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 TMEM78Q5T7P6 136 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 NEUROG1Q92886 237 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 PRELID3AQ96N28 172 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 TUBD1Q9UJT1 453 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 ABCA4P78363 2273 aa6.53□□□□□ -1.36
PRKCA-202ENST00000413366 TRAV8-7A0A075B6U6 113 aa6.52□□□□□ -1.37
PRKCA-202ENST00000413366 NPIPB6E9PJ23 425 aa6.52□□□□□ -1.37
PRKCA-202ENST00000413366 ACSF3Q4G176 576 aaPredicted RBP6.52□□□□□ -1.37
PRKCA-202ENST00000413366 BEX4Q9NWD9 120 aaPredicted RBP6.52□□□□□ -1.37
PRKCA-202ENST00000413366 FLRT3Q9NZU0 649 aa6.52□□□□□ -1.37
PRKCA-202ENST00000413366 LDLRAD4O15165 306 aa6.52□□□□□ -1.37
PRKCA-202ENST00000413366 EWSR1Q01844 656 aaKnown RBP eCLIP6.52□□□□□ -1.377e-7■■■□□ 14.8
PRKCA-202ENST00000413366 GCSAMLQ5JQS6 135 aa6.52□□□□□ -1.37
PRKCA-202ENST00000413366 ATG4DQ86TL0 474 aaPredicted RBP6.52□□□□□ -1.37
PRKCA-202ENST00000413366 FAM53AQ6NSI3 398 aaPredicted RBP6.52□□□□□ -1.37
PRKCA-202ENST00000413366 ST20Q9HBF5 79 aa6.52□□□□□ -1.37
PRKCA-202ENST00000413366 ARFGEF1Q9Y6D6 1849 aa6.52□□□□□ -1.37
PRKCA-202ENST00000413366 A0A1B0GW15 77 aa6.52□□□□□ -1.37
PRKCA-202ENST00000413366 DSCR9P59020 149 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms