RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 AJUBAQ96IF1 538 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 SMIM7Q9BQ49 75 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 PAAF1Q9BRP4 392 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 FAM234AQ9H0X4 552 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 MAP1LC3AQ9H492 121 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 GOLGA2P5Q9HBQ8 144 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 GNG13Q9P2W3 67 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 DOCK3Q8IZD9 2030 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 TRAV24A0A0B4J272 114 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 FAM90A26D6RGX4 464 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 H3BMH7 237 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 BLVRBP30043 206 aaPredicted RBP4.37□□□□□ -1.71
HERC4-205ENST00000412272 FCGR2BP31994 310 aaPredicted RBP4.37□□□□□ -1.71
HERC4-205ENST00000412272 REG1BP48304 166 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 CLDN17P56750 224 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 FOXI1Q12951 378 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 HSPB3Q12988 150 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 PRR22Q8IZ63 422 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 KLK6Q92876 244 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 TMEM14AQ9Y6G1 99 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 GOLGB1Q14789 3259 aaKnown RBP4.37□□□□□ -1.71
HERC4-205ENST00000412272 ZNF816-ZNF321PA0A0X1KG74 233 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 A0A1W2PRD5 423 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 A0A1W2PRF3 423 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 A0A1W2PRM7 423 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 C2orf70A6NJV1 201 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 TMEM14DPA8MWL7 114 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 ZNF561-AS1K7EIQ3 104 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 TNFSF11O14788 317 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 MYOD1P15172 320 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 TAS2R46P59540 309 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 RPS28P62857 69 aaKnown RBP4.37□□□□□ -1.71
HERC4-205ENST00000412272 MFAP5Q13361 173 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 ZNF627Q7L945 461 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 COQ2Q96H96 371 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 MRPL18Q9H0U6 180 aaKnown RBP4.37□□□□□ -1.71
HERC4-205ENST00000412272 WDR76Q9H967 626 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 DLL3Q9NYJ7 618 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 IDI2-AS1Q9NZ38 188 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 C1RLQ9NZP8 487 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 CKLFQ9UBR5 152 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 A0A1W2PP11 408 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 HMGN2P05204 90 aaKnown RBP4.36□□□□□ -1.71
HERC4-205ENST00000412272 DBIP07108 87 aaKnown RBP4.36□□□□□ -1.71
HERC4-205ENST00000412272 CBLN1P23435 193 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 PPP1CBP62140 327 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 TNFAIP6P98066 277 aaPredicted RBP4.36□□□□□ -1.71
HERC4-205ENST00000412272 FMODQ06828 376 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 OR10J3Q5JRS4 329 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 NUP43Q8NFH3 380 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 OR1L3Q8NH93 324 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 OR5P3Q8WZ94 311 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 ZNF488Q96MN9 340 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 KCNK15Q9H427 330 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 CES1P1Q9UKY3 287 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 PIGLQ9Y2B2 252 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 SOX21Q9Y651 276 aaPredicted RBP4.36□□□□□ -1.71
HERC4-205ENST00000412272 V9GYY9 64 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 C1orf105O95561 183 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 SFTPDP35247 375 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 GNG5P63218 68 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 TBC1D28Q2M2D7 210 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 Q56UQ5 140 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 SAMD5Q5TGI4 173 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 RASL11AQ6T310 242 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 FGFRL1Q8N441 504 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 TSKUQ8WUA8 353 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 RPEQ96AT9 228 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 MMABQ96EY8 250 aaPredicted RBP4.36□□□□□ -1.71
HERC4-205ENST00000412272 SLC25A44Q96H78 314 aaPredicted RBP4.36□□□□□ -1.71
HERC4-205ENST00000412272 SGK494Q96LW2 274 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 EDA2RQ9HAV5 297 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 LSM5Q9Y4Y9 91 aaKnown RBP4.36□□□□□ -1.71
HERC4-205ENST00000412272 MED12LQ86YW9 2145 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 TRBV9A0A0B4J1U6 114 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 FAM24AA6NFZ4 105 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 SYS1-DBNDD2H3BUS1 97 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 KLF7O75840 302 aaPredicted RBP4.36□□□□□ -1.71
HERC4-205ENST00000412272 HLA-DQA2P01906 255 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 IFITM1P13164 125 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 PTGDSP41222 190 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 EWSR1Q01844 656 aaKnown RBP eCLIP4.36□□□□□ -1.716e-7■■■□□ 16.8
HERC4-205ENST00000412272 ZNF324BQ6AW86 544 aaPredicted RBP4.36□□□□□ -1.71
HERC4-205ENST00000412272 OR10G8Q8NGN5 311 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 ZNF502Q8TBZ5 544 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 ZPLD1Q8TCW7 415 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 ZNF665Q9H7R5 613 aa4.36□□□□□ -1.71
HERC4-205ENST00000412272 hDV102S1A0JD36 115 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 ZFP92A6NM28 416 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 PGLYRP1O75594 196 aaPredicted RBP4.35□□□□□ -1.71
HERC4-205ENST00000412272 CXorf1O96002 111 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 FCGR2AP12318 317 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 ORM2P19652 201 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 UNC119Q13432 240 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 WDR38Q5JTN6 314 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 ABHD17CQ6PCB6 329 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 C1QL2Q7Z5L3 287 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 FAM19A2Q8N3H0 131 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 C3orf56Q8N813 242 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 GATAD1Q8WUU5 269 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms