RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 LHBP01229 141 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 RBP1P09455 135 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 SMIM17P0DL12 118 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 TPI1P60174 286 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 LCN6P62502 163 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 EIF4EBP2Q13542 120 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-204ENST00000412061 WDR59Q6PJI9 974 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 SAXO1Q8IYX7 474 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 ZNF283Q8N7M2 679 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 TMEM105Q8N8V8 129 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 SPANXA2-OT1Q8N9U9 137 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 OR13C8Q8NGS7 320 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 SLC25A40Q8TBP6 338 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 MRPL30Q8TCC3 161 aaKnown RBP2.88□□□□□ -1.95
BRCA1-204ENST00000412061 GPR119Q8TDV5 335 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 SKA2Q8WVK7 121 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-204ENST00000412061 OR5P3Q8WZ94 311 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 RNASE6Q93091 150 aaKnown RBP2.88□□□□□ -1.95
BRCA1-204ENST00000412061 BORCS5Q969J3 196 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 IGF2BP2-AS1Q96M15 143 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 IP6K3Q96PC2 410 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 C1QTNF6Q9BXI9 259 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 ERGIC3Q9Y282 383 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 ICOSQ9Y6W8 199 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 NLRC5Q86WI3 1866 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 DOCK9Q9BZ29 2069 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 IGSF23A1L1A6 192 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 C9JCJ5 164 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 CLDN25C9JDP6 229 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 PFDN1O60925 122 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 ZNF324O75467 553 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-204ENST00000412061 LGALS1P09382 135 aaKnown RBP2.87□□□□□ -1.95
BRCA1-204ENST00000412061 ZNF705DP0CH99 300 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-204ENST00000412061 PPIBP23284 216 aaKnown RBP2.87□□□□□ -1.95
BRCA1-204ENST00000412061 CRABP1P29762 137 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 MPV17P39210 176 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 TBPL1P62380 186 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 RBX1P62877 108 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 FLI1Q01543 452 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-204ENST00000412061 TMEM128Q5BJH2 165 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 DHFR2Q86XF0 187 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 H1FOOQ8IZA3 346 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-204ENST00000412061 DAND5Q8N907 189 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 ST6GALNAC3Q8NDV1 305 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 ACOT12Q8WYK0 555 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 HIST1H2BAQ96A08 127 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 RMND5BQ96G75 393 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-204ENST00000412061 NKX6-2Q9C056 277 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-204ENST00000412061 LINC00588Q9Y4M8 146 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 CABIN1Q9Y6J0 2220 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 NUP160Q12769 1436 aa2.87□□□□□ -1.95
BRCA1-204ENST00000412061 SETD5Q9C0A6 1442 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 A0A1W2PRE2 83 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 DPRXA6NFQ7 191 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 PPBPP02775 128 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 SMIM10L2AP0DMW4 78 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 SMIM10L2BP0DMW5 78 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 NPY1RP25929 384 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 CRYBB3P26998 211 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 CRABP2P29373 138 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 ATP5G3P48201 142 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 SERPINB10P48595 397 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 RAB13P51153 203 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 AKR1C2P52895 323 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 HBA1P69905 142 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 OR8G1Q15617 311 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 MRPL51Q4U2R6 128 aaKnown RBP2.86□□□□□ -1.95
BRCA1-204ENST00000412061 SH2D6Q7Z4S9 175 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 C12orf45Q8N5I9 185 aaPredicted RBP2.86□□□□□ -1.95
BRCA1-204ENST00000412061 UBALD1Q8TB05 177 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 DNAJC30Q96LL9 226 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 LYSMD1Q96S90 227 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 SERPINI1Q99574 410 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 TMEM70Q9BUB7 260 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 RSPO3Q9BXY4 272 aaPredicted RBP2.86□□□□□ -1.95
BRCA1-204ENST00000412061 GSKIPQ9P0R6 139 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 TRAPPC1Q9Y5R8 145 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 KIF24Q5T7B8 1368 aa2.86□□□□□ -1.95
BRCA1-204ENST00000412061 DSCAMO60469 2012 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 PCM1Q15154 2024 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 BAZ1BQ9UIG0 1483 aaKnown RBP2.85□□□□□ -1.95
BRCA1-204ENST00000412061 CEP152O94986 1710 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 CRB1P82279 1406 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 SSH2Q76I76 1423 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 TRAV9-1A0A075B6T8 112 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 TRAV4A0A0B4J268 109 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 A0A0B4J2C4 111 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 SIGLEC16A6NMB1 481 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 E7EQ34 232 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 H3BMM0 161 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 AIPO00170 330 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 UBE2L6O14933 153 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 SH2D1AO60880 128 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 BANF1O75531 89 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 SRP19P09132 144 aaKnown RBP2.85□□□□□ -1.95
BRCA1-204ENST00000412061 C10orf91Q5T1B1 145 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 AMTNQ6UX39 209 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 TOMM20LQ6UXN7 152 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 ZFAND2AQ8N6M9 145 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 RPS4Y2Q8TD47 263 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms