RNA–Protein interactions for RNA: ENST00000411975.5

ABCA13-201, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-201ENST00000411975 ZNF146Q15072 292 aa10.08□□□□□ -0.8
ABCA13-201ENST00000411975 VAMP8Q9BV40 100 aa10.08□□□□□ -0.8
ABCA13-201ENST00000411975 TMEM106BQ9NUM4 274 aa10.08□□□□□ -0.8
ABCA13-201ENST00000411975 KBTBD11-OT1A0A1B0GTJ5 212 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 P01737 135 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 FAM87AP0C7U9 286 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 MDKP21741 143 aaPredicted RBP10.07□□□□□ -0.8
ABCA13-201ENST00000411975 HTR1DP28221 377 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 FAM3BP58499 235 aaPredicted RBP10.07□□□□□ -0.8
ABCA13-201ENST00000411975 PACRGQ96M98 296 aaPredicted RBP10.07□□□□□ -0.8
ABCA13-201ENST00000411975 ZNF430Q9H8G1 570 aaPredicted RBP10.07□□□□□ -0.8
ABCA13-201ENST00000411975 PTBP3O95758 552 aaKnown RBP10.07□□□□□ -0.8
ABCA13-201ENST00000411975 SNRPCP09234 159 aaKnown RBP10.07□□□□□ -0.8
ABCA13-201ENST00000411975 NUBP1P53384 320 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 BSPH1Q075Z2 132 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 SSX7Q7RTT5 188 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 RTN4RL2Q86UN3 420 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 OR5AU1Q8NGC0 362 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 CREBBPQ92793 2442 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 ZNF98A6NK75 572 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 FOXF2Q12947 444 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 LRRC75BQ2VPJ9 315 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 ZNF506Q5JVG8 444 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 GRAMD2BQ96HH9 432 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 HIGD1AQ9Y241 93 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 SNURFLB1AK76 121 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 TM4SF5O14894 197 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 APOBEC3AP31941 199 aaPredicted RBP10.07□□□□□ -0.8
ABCA13-201ENST00000411975 IER3P46695 156 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 ID3Q02535 119 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.07□□□□□ -0.8
ABCA13-201ENST00000411975 LINC01560Q8TB33 94 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 SRD5A3Q9H8P0 318 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 RALYQ9UKM9 306 aaKnown RBP10.07□□□□□ -0.8
ABCA13-201ENST00000411975 ARL2-SNX15V9GYD0 113 aa10.07□□□□□ -0.8
ABCA13-201ENST00000411975 LOC102723971A0A1B0GUV8 181 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 ARL14EPLP0DKL9 152 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 HIST1H1EP10412 219 aaKnown RBP10.06□□□□□ -0.8
ABCA13-201ENST00000411975 ATP5IP56385 69 aaPredicted RBP10.06□□□□□ -0.8
ABCA13-201ENST00000411975 OR1L6Q8NGR2 347 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 TNFRSF19Q9NS68 423 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 IGHV1-18A0A0C4DH31 117 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 CXorf65A6NEN9 183 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 TMEM250H0YL14 139 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 PLAUP00749 431 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 TRGC2P03986 189 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 KLRB1Q12918 225 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 C17orf100A8MU93 164 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 NAPSAO96009 420 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 KIR2DL2P43627 348 aaPredicted RBP10.06□□□□□ -0.8
ABCA13-201ENST00000411975 ARF6P62330 175 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 ZNF324BQ6AW86 544 aaPredicted RBP10.06□□□□□ -0.8
ABCA13-201ENST00000411975 SCNM1Q9BWG6 230 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 CLEC7AQ9BXN2 247 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 MIOXQ9UGB7 285 aa10.06□□□□□ -0.8
ABCA13-201ENST00000411975 TRAV20A0A0B4J274 112 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 CCKARP32238 428 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 ECSCRQ19T08 205 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 SMUG1Q53HV7 270 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 ATRAIDQ6UW56 229 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 OSR1Q8TAX0 266 aaPredicted RBP10.05□□□□□ -0.8
ABCA13-201ENST00000411975 NPCDR1Q9BY65 106 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 PARLQ9H300 379 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 PARD6AQ9NPB6 346 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 C8orf88P0DMB2 117 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 HIST1H1BP16401 226 aaKnown RBP10.05□□□□□ -0.8
ABCA13-201ENST00000411975 BMI1P35226 326 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 HGFACQ04756 655 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 SRSF7Q16629 238 aaKnown RBP eCLIP10.05□□□□□ -0.8
ABCA13-201ENST00000411975 HLA-DRB5Q30154 266 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 ZNF525Q8N782 197 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 WDR31Q8NA23 367 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 PRO1933Q9H354 126 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 GOSR1O95249 250 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 CA2P00918 260 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 HIST1H2BAQ96A08 127 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 DNAJC4Q9NNZ3 241 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 MED13LQ71F56 2210 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 FGF16O43320 207 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 STPG3Q8N7X2 389 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 NABP2Q9BQ15 211 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 MRPL37Q9BZE1 423 aaKnown RBP10.05□□□□□ -0.8
ABCA13-201ENST00000411975 LRRK1Q38SD2 2015 aa10.05□□□□□ -0.8
ABCA13-201ENST00000411975 SHANK1Q9Y566 2161 aa10.04□□□□□ -0.8
ABCA13-201ENST00000411975 USF3Q68DE3 2245 aa10.04□□□□□ -0.8
ABCA13-201ENST00000411975 SLC31A2O15432 143 aa10.04□□□□□ -0.8
ABCA13-201ENST00000411975 LIPFP07098 398 aa10.04□□□□□ -0.8
ABCA13-201ENST00000411975 PAX6P26367 422 aa10.04□□□□□ -0.8
ABCA13-201ENST00000411975 COMPP49747 757 aaPredicted RBP10.04□□□□□ -0.8
ABCA13-201ENST00000411975 OR4A47Q6IF82 309 aa10.04□□□□□ -0.8
ABCA13-201ENST00000411975 OR4D5Q8NGN0 318 aa10.04□□□□□ -0.8
ABCA13-201ENST00000411975 PRSS3P2Q8NHM4 247 aa10.04□□□□□ -0.8
ABCA13-201ENST00000411975 STARD4Q96DR4 205 aa10.04□□□□□ -0.8
ABCA13-201ENST00000411975 PLSCR4Q9NRQ2 329 aa10.04□□□□□ -0.8
ABCA13-201ENST00000411975 E9PLN8 166 aa10.04□□□□□ -0.8
ABCA13-201ENST00000411975 SRP14P37108 136 aaKnown RBP10.04□□□□□ -0.8
ABCA13-201ENST00000411975 PROK2Q9HC23 129 aa10.04□□□□□ -0.8
ABCA13-201ENST00000411975 YPEL1O60688 119 aa10.04□□□□□ -0.8
ABCA13-201ENST00000411975 TFF1P04155 84 aa10.04□□□□□ -0.8
ABCA13-201ENST00000411975 MEF2CQ06413 473 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms