RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 C19orf73Q9NVV2 129 aa16.98■□□□□ 0.31
MSH6-202ENST00000411819 SIGLEC8Q9NYZ4 499 aa16.98■□□□□ 0.31
MSH6-202ENST00000411819 ZNF257Q9Y2Q1 563 aa16.98■□□□□ 0.31
MSH6-202ENST00000411819 TEX22C9J3V5 150 aa16.97■□□□□ 0.31
MSH6-202ENST00000411819 KIR2DS2P43631 304 aa16.97■□□□□ 0.31
MSH6-202ENST00000411819 HOGA1Q86XE5 327 aa16.97■□□□□ 0.31
MSH6-202ENST00000411819 PUSL1Q8N0Z8 303 aaKnown RBP16.97■□□□□ 0.31
MSH6-202ENST00000411819 DIABLOQ9NR28 239 aa16.97■□□□□ 0.31
MSH6-202ENST00000411819 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.96■□□□□ 0.31
MSH6-202ENST00000411819 A0A0A6YYH2 397 aa16.96■□□□□ 0.31
MSH6-202ENST00000411819 IZUMO1RA6ND01 250 aa16.96■□□□□ 0.31
MSH6-202ENST00000411819 A6NJ64 397 aa16.96■□□□□ 0.31
MSH6-202ENST00000411819 A8MZ25 164 aa16.96■□□□□ 0.31
MSH6-202ENST00000411819 HRASP01112 189 aa16.96■□□□□ 0.31
MSH6-202ENST00000411819 PPYP01298 95 aa16.96■□□□□ 0.31
MSH6-202ENST00000411819 FXYD4P59646 89 aa16.96■□□□□ 0.31
MSH6-202ENST00000411819 CASC10Q5T4H9 136 aa16.96■□□□□ 0.31
MSH6-202ENST00000411819 PALMDQ9NP74 551 aa16.96■□□□□ 0.31
MSH6-202ENST00000411819 DNAH7Q8WXX0 4024 aa16.96■□□□□ 0.31
MSH6-202ENST00000411819 PPP5D1E7EU14 171 aa16.95■□□□□ 0.3
MSH6-202ENST00000411819 AIREO43918 545 aa16.95■□□□□ 0.3
MSH6-202ENST00000411819 IL6RP08887 468 aaPredicted RBP16.95■□□□□ 0.3
MSH6-202ENST00000411819 MAS1LP35410 378 aa16.95■□□□□ 0.3
MSH6-202ENST00000411819 BRWD1-AS2P59051 145 aa16.95■□□□□ 0.3
MSH6-202ENST00000411819 DYNLRB2Q8TF09 96 aa16.95■□□□□ 0.3
MSH6-202ENST00000411819 SLC5A7Q9GZV3 580 aa16.95■□□□□ 0.3
MSH6-202ENST00000411819 AUNIPQ9H7T9 357 aa16.95■□□□□ 0.3
MSH6-202ENST00000411819 TUBA4BQ9H853 241 aa16.95■□□□□ 0.3
MSH6-202ENST00000411819 FBXL7Q9UJT9 491 aa16.95■□□□□ 0.3
MSH6-202ENST00000411819 MEIS3P1A6NDR6 274 aa16.94■□□□□ 0.3
MSH6-202ENST00000411819 NPIPB5A8MRT5 1133 aa16.94■□□□□ 0.3
MSH6-202ENST00000411819 E7EUB6 86 aa16.94■□□□□ 0.3
MSH6-202ENST00000411819 LYL1P12980 280 aa16.94■□□□□ 0.3
MSH6-202ENST00000411819 RPL8P62917 257 aaKnown RBP16.94■□□□□ 0.3
MSH6-202ENST00000411819 FAM209BQ5JX69 171 aa16.94■□□□□ 0.3
MSH6-202ENST00000411819 SPAG16Q8N0X2 631 aa16.94■□□□□ 0.3
MSH6-202ENST00000411819 OR2K2Q8NGT1 345 aa16.94■□□□□ 0.3
MSH6-202ENST00000411819 KCTD12Q96CX2 325 aaKnown RBP16.94■□□□□ 0.3
MSH6-202ENST00000411819 CITED4Q96RK1 184 aa16.94■□□□□ 0.3
MSH6-202ENST00000411819 HRASLSQ9HDD0 168 aa16.94■□□□□ 0.3
MSH6-202ENST00000411819 SLC2A9Q9NRM0 540 aa16.94■□□□□ 0.3
MSH6-202ENST00000411819 DHFRP00374 187 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 IGHV3-23P01764 117 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 HLA-AP01891 365 aaKnown RBP16.93■□□□□ 0.3
MSH6-202ENST00000411819 ZNF735P0CB33 412 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 MYOD1P15172 320 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 AREGP15514 252 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 CATR1Q13166 79 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 MSMO1Q15800 293 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 TIMM50Q3ZCQ8 353 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 KCTD21Q4G0X4 260 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 OR4A47Q6IF82 309 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 TMEM17Q86X19 198 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 ZBTB34Q8NCN2 500 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 SPATA25Q9BR10 227 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 THAP7Q9BT49 309 aaPredicted RBP16.93■□□□□ 0.3
MSH6-202ENST00000411819 IFT46Q9NQC8 304 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 S4R3C0 116 aa16.93■□□□□ 0.3
MSH6-202ENST00000411819 A0A1B0GW64 132 aa16.92■□□□□ 0.3
MSH6-202ENST00000411819 SULT1C2O00338 296 aa16.92■□□□□ 0.3
MSH6-202ENST00000411819 GGCTO75223 188 aaKnown RBP16.92■□□□□ 0.3
MSH6-202ENST00000411819 REG1AP05451 166 aa16.92■□□□□ 0.3
MSH6-202ENST00000411819 HLA-GP17693 338 aa16.92■□□□□ 0.3
MSH6-202ENST00000411819 CBX5P45973 191 aa16.92■□□□□ 0.3
MSH6-202ENST00000411819 CD300EQ496F6 205 aaPredicted RBP16.92■□□□□ 0.3
MSH6-202ENST00000411819 AIFM2Q9BRQ8 373 aa16.92■□□□□ 0.3
MSH6-202ENST00000411819 NDUFB8O95169 186 aa16.91■□□□□ 0.3
MSH6-202ENST00000411819 DEFA4P12838 97 aa16.91■□□□□ 0.3
MSH6-202ENST00000411819 PSMB6P28072 239 aa16.91■□□□□ 0.3
MSH6-202ENST00000411819 ARL3P36405 182 aa16.91■□□□□ 0.3
MSH6-202ENST00000411819 TGFBR1P36897 503 aa16.91■□□□□ 0.3
MSH6-202ENST00000411819 CD81P60033 236 aa16.91■□□□□ 0.3
MSH6-202ENST00000411819 OR5AP2Q8NGF4 316 aa16.91■□□□□ 0.3
MSH6-202ENST00000411819 OR51H1Q8NH63 302 aa16.91■□□□□ 0.3
MSH6-202ENST00000411819 OR4A5Q8NH83 315 aa16.91■□□□□ 0.3
MSH6-202ENST00000411819 ISOC1Q96CN7 298 aa16.91■□□□□ 0.3
MSH6-202ENST00000411819 PLEKHA3Q9HB20 300 aa16.91■□□□□ 0.3
MSH6-202ENST00000411819 BET1LQ9NYM9 111 aa16.91■□□□□ 0.3
MSH6-202ENST00000411819 OR2C1O95371 312 aa16.9■□□□□ 0.3
MSH6-202ENST00000411819 HERV-K104P61576 105 aa16.9■□□□□ 0.3
MSH6-202ENST00000411819 HAGHQ16775 308 aa16.9■□□□□ 0.3
MSH6-202ENST00000411819 AADACL3Q5VUY0 350 aa16.9■□□□□ 0.3
MSH6-202ENST00000411819 CLEC19AQ6UXS0 136 aa16.9■□□□□ 0.3
MSH6-202ENST00000411819 ADAMTSL5Q6ZMM2 481 aa16.9■□□□□ 0.3
MSH6-202ENST00000411819 ZNF818PQ6ZRF7 136 aa16.9■□□□□ 0.3
MSH6-202ENST00000411819 EEF1AKMT3Q96AZ1 226 aa16.9■□□□□ 0.3
MSH6-202ENST00000411819 CCDC140Q96MF4 163 aa16.9■□□□□ 0.3
MSH6-202ENST00000411819 FANCD2OSQ96PS1 177 aa16.9■□□□□ 0.3
MSH6-202ENST00000411819 C2orf70A6NJV1 201 aa16.89■□□□□ 0.29
MSH6-202ENST00000411819 RBFOX2O43251 390 aaKnown RBP eCLIP16.89■□□□□ 0.294e-10■□□□□ 8.3
MSH6-202ENST00000411819 TMEM127O75204 238 aa16.89■□□□□ 0.29
MSH6-202ENST00000411819 CRYGCP07315 174 aa16.89■□□□□ 0.29
MSH6-202ENST00000411819 CTRB1P17538 263 aa16.89■□□□□ 0.29
MSH6-202ENST00000411819 EDN2P20800 178 aa16.89■□□□□ 0.29
MSH6-202ENST00000411819 MECP2P51608 486 aaKnown RBP16.89■□□□□ 0.29
MSH6-202ENST00000411819 TAS2R31P59538 309 aa16.89■□□□□ 0.29
MSH6-202ENST00000411819 ZFAND6Q6FIF0 208 aa16.89■□□□□ 0.29
MSH6-202ENST00000411819 CTRB2Q6GPI1 263 aa16.89■□□□□ 0.29
MSH6-202ENST00000411819 S100A16Q96FQ6 103 aaKnown RBP16.89■□□□□ 0.29
MSH6-202ENST00000411819 SLC2A8Q9NY64 477 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms