RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 HAAOP46952 286 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 CCT5P48643 541 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 TSPEAR-AS2P59090 65 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 TAS2R30P59541 319 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 ELOF1P60002 83 aaKnown RBP-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 C1QTNF8P60827 252 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 NUTF2P61970 127 aaKnown RBP-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 RPS4XP62701 263 aaKnown RBP-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 BTG2P78543 158 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 H3F3AP84243 136 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 NUCB1Q02818 461 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 PIN1Q13526 163 aaPredicted RBP-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 GNA13Q14344 377 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 PSMD6Q15008 389 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 CCNG2Q16589 344 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 MIAQ16674 131 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 CDO1Q16878 200 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 SLC36A3Q495N2 470 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 SULT6B1Q6IMI4 303 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 LCN15Q6UWW0 184 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 GSTA5Q7RTV2 222 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 DPY19L4Q7Z388 723 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 SCD5Q86SK9 330 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 KRTCAP2Q8N6L1 136 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 SPERTQ8NA61 448 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 NUP35Q8NFH5 326 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR2M7Q8NG81 312 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR7G1Q8NGA0 311 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR4C5Q8NGB2 326 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 TMEM254Q8TBM7 123 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 Q8WTZ3 238 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 SEPT8Q92599 483 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 KLK6Q92876 244 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 NCLNQ969V3 563 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 SLAMF9Q96A28 289 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 GDAP1L1Q96MZ0 367 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR5B2Q96R09 309 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 CMSS1Q9BQ75 279 aaKnown RBP-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 TMEM208Q9BTX3 173 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 COMMD4Q9H0A8 199 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 ILKAPQ9H0C8 392 aaPredicted RBP-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 POLR3FQ9H1D9 316 aaPredicted RBP-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 POPDC3Q9HBV1 291 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 MRPL47Q9HD33 250 aaKnown RBP-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 C12orf4Q9NQ89 552 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 MS4A12Q9NXJ0 267 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 BET1LQ9NYM9 111 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 MED11Q9P086 117 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 GPR132Q9UNW8 380 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 PIGLQ9Y2B2 252 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 CMAHPQ9Y471 501 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 NUBP2Q9Y5Y2 271 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 TAF1LQ8IZX4 1826 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 CPDO75976 1380 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 KANK1Q14678 1352 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 KIF15Q9NS87 1388 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 YTHDC2Q9H6S0 1430 aaKnown RBP-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 RIMS2Q9UQ26 1411 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 LY75O60449 1722 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 LRRC7Q96NW7 1537 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 LOC100509620A0A075B734 347 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 TRAV12-3A0A0B4J271 114 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 A6NCN8 305 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 CFAP73A6NFT4 308 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 HIGD1CA8MV81 97 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 HCG22E2RYF7 251 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 H0YJX3 145 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 FGF16O43320 207 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 HSF2BPO75031 334 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 PITX3O75364 302 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 WBP4O75554 376 aaKnown RBP-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 IL33O95760 270 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 GSTA1P08263 222 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 GOLGA8HP0CJ92 632 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 PMCHP20382 165 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 HIST1H1TP22492 207 aaPredicted RBP-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 AP1S1P61966 158 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 RAB11AP62491 216 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 RPS24P62847 133 aaKnown RBP-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 DEFA6Q01524 100 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 IL10RBQ08334 325 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 EBPQ15125 230 aaKnown RBP-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 QPRTQ15274 297 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR1C1Q15619 314 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 AKIRIN2Q53H80 203 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 AKR1C8PQ5T2L2 129 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 ERICH5Q6P6B1 374 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 SEPT14Q6ZU15 432 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 GPR141Q7Z602 305 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 DEFB128Q7Z7B8 93 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 MRPL52Q86TS9 123 aaKnown RBP-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 C20orf197Q8N268 126 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 PDILTQ8N807 584 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 RDH11Q8TC12 318 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 GRK7Q8WTQ7 553 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 KCTD4Q8WVF5 259 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 RIT1Q92963 219 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 GPR146Q96CH1 333 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 MRPL48Q96GC5 212 aaKnown RBP-2.5□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms