RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 VDAC1P21796 283 aa12.07□□□□□ -0.48
LSM5-207ENST00000410044 G6PCP35575 357 aa12.07□□□□□ -0.48
LSM5-207ENST00000410044 RAB25P57735 213 aa12.07□□□□□ -0.48
LSM5-207ENST00000410044 ERVK-16P61578 105 aa12.07□□□□□ -0.48
LSM5-207ENST00000410044 BLCAPP62952 87 aa12.07□□□□□ -0.48
LSM5-207ENST00000410044 TMEM268Q5VZI3 342 aa12.07□□□□□ -0.48
LSM5-207ENST00000410044 PRIMA1Q86XR5 153 aa12.07□□□□□ -0.48
LSM5-207ENST00000410044 FAM219AQ8IW50 185 aa12.07□□□□□ -0.48
LSM5-207ENST00000410044 VKORC1L1Q8N0U8 176 aa12.07□□□□□ -0.48
LSM5-207ENST00000410044 DMBX1Q8NFW5 382 aa12.07□□□□□ -0.48
LSM5-207ENST00000410044 MMP24Q9Y5R2 645 aa12.07□□□□□ -0.48
LSM5-207ENST00000410044 PLXNB1O43157 2135 aa12.07□□□□□ -0.48
LSM5-207ENST00000410044 DBX1A6NMT0 343 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 FCN1O00602 326 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 IGHG2P01859 326 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 MAS1LP35410 378 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 PRSS8Q16651 343 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 ZNF562Q6V9R5 426 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 H2BFWTQ7Z2G1 175 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 MMD2Q8IY49 270 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 OR52B4Q8NGK2 314 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 COQ8AQ8NI60 647 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 CASTOR1Q8WTX7 329 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 SEC22CQ9BRL7 303 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 PRSS22Q9GZN4 317 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 GPN1Q9HCN4 374 aaPredicted RBP12.06□□□□□ -0.48
LSM5-207ENST00000410044 TMEM140Q9NV12 185 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 PRR13Q9NZ81 148 aa12.06□□□□□ -0.48
LSM5-207ENST00000410044 C7orf66A4D0T2 115 aa12.05□□□□□ -0.48
LSM5-207ENST00000410044 CREBL2O60519 120 aaPredicted RBP12.05□□□□□ -0.48
LSM5-207ENST00000410044 NDUFA7O95182 113 aa12.05□□□□□ -0.48
LSM5-207ENST00000410044 CRYBA1P05813 215 aa12.05□□□□□ -0.48
LSM5-207ENST00000410044 RELBQ01201 579 aa12.05□□□□□ -0.48
LSM5-207ENST00000410044 NMSQ5H8A3 153 aa12.05□□□□□ -0.48
LSM5-207ENST00000410044 SSX9Q7RTT3 188 aa12.05□□□□□ -0.48
LSM5-207ENST00000410044 LYZL2Q7Z4W2 148 aa12.05□□□□□ -0.48
LSM5-207ENST00000410044 SLC35G3Q8N808 338 aa12.05□□□□□ -0.48
LSM5-207ENST00000410044 PHB2Q99623 299 aa12.05□□□□□ -0.48
LSM5-207ENST00000410044 C16orf95Q9H693 158 aa12.05□□□□□ -0.48
LSM5-207ENST00000410044 ZNF702PQ9H963 129 aa12.05□□□□□ -0.48
LSM5-207ENST00000410044 TPSG1Q9NRR2 321 aa12.05□□□□□ -0.48
LSM5-207ENST00000410044 TMED3Q9Y3Q3 217 aa12.05□□□□□ -0.48
LSM5-207ENST00000410044 CUBNO60494 3623 aa12.04□□□□□ -0.48
LSM5-207ENST00000410044 IGHV7-81A0A0B4J1V7 117 aa12.04□□□□□ -0.48
LSM5-207ENST00000410044 TRAV3A0A0B4J244 114 aa12.04□□□□□ -0.48
LSM5-207ENST00000410044 A0A0G2JRQ6 117 aa12.04□□□□□ -0.48
LSM5-207ENST00000410044 OR9G9P0C7N8 305 aa12.04□□□□□ -0.48
LSM5-207ENST00000410044 CX3CL1P78423 397 aa12.04□□□□□ -0.48
LSM5-207ENST00000410044 SSBP2P81877 361 aaPredicted RBP12.04□□□□□ -0.48
LSM5-207ENST00000410044 PJVKQ0ZLH3 352 aa12.04□□□□□ -0.48
LSM5-207ENST00000410044 PLGLAQ15195 96 aa12.04□□□□□ -0.48
LSM5-207ENST00000410044 AARDQ4LEZ3 155 aa12.04□□□□□ -0.48
LSM5-207ENST00000410044 Q6ZS46 218 aa12.04□□□□□ -0.48
LSM5-207ENST00000410044 Q6ZSV7 163 aa12.04□□□□□ -0.48
LSM5-207ENST00000410044 C12orf45Q8N5I9 185 aaPredicted RBP12.04□□□□□ -0.48
LSM5-207ENST00000410044 GPR146Q96CH1 333 aa12.04□□□□□ -0.48
LSM5-207ENST00000410044 RRNAD1Q96FB5 475 aaKnown RBP12.04□□□□□ -0.48
LSM5-207ENST00000410044 ZNF430Q9H8G1 570 aaPredicted RBP12.04□□□□□ -0.48
LSM5-207ENST00000410044 ZNF580Q9UK33 172 aa12.04□□□□□ -0.48
LSM5-207ENST00000410044 A0A0B4J293 547 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 KCNAB3O43448 404 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 SNAPC5O75971 98 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 CA2P00918 260 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 SLC25A6P12236 298 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 HLA-GP17693 338 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 AKR1C2P52895 323 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 CRIP2P52943 208 aaPredicted RBP12.03□□□□□ -0.48
LSM5-207ENST00000410044 RPL8P62917 257 aaKnown RBP12.03□□□□□ -0.48
LSM5-207ENST00000410044 TATDN3Q17R31 274 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 Q6ZRM9 215 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 ZNF429Q86V71 674 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 FOXRED2Q8IWF2 684 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 HSPB9Q9BQS6 159 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 OR51J1Q9H342 316 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 COA4Q9NYJ1 87 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 FKBP11Q9NYL4 201 aa12.03□□□□□ -0.48
LSM5-207ENST00000410044 A0A1B0GU03 582 aa12.02□□□□□ -0.49
LSM5-207ENST00000410044 IGF1P05019 195 aa12.02□□□□□ -0.49
LSM5-207ENST00000410044 HKR1P10072 659 aa12.02□□□□□ -0.49
LSM5-207ENST00000410044 CLCC1Q96S66 551 aa12.02□□□□□ -0.49
LSM5-207ENST00000410044 TMEM14BQ9NUH8 114 aa12.02□□□□□ -0.49
LSM5-207ENST00000410044 PRNDQ9UKY0 176 aa12.02□□□□□ -0.49
LSM5-207ENST00000410044 FOXA2Q9Y261 457 aaPredicted RBP12.02□□□□□ -0.49
LSM5-207ENST00000410044 ZNF257Q9Y2Q1 563 aa12.02□□□□□ -0.49
LSM5-207ENST00000410044 TET2Q6N021 2002 aaPredicted RBP12.02□□□□□ -0.49
LSM5-207ENST00000410044 SH2D7A6NKC9 451 aaPredicted RBP12.01□□□□□ -0.49
LSM5-207ENST00000410044 LINC01548A6NM66 108 aa12.01□□□□□ -0.49
LSM5-207ENST00000410044 C15orf61A6NNL5 157 aa12.01□□□□□ -0.49
LSM5-207ENST00000410044 EGR2P11161 476 aaPredicted RBP12.01□□□□□ -0.49
LSM5-207ENST00000410044 COMPP49747 757 aaPredicted RBP12.01□□□□□ -0.49
LSM5-207ENST00000410044 SRSF2Q01130 221 aaKnown RBP12.01□□□□□ -0.49
LSM5-207ENST00000410044 FXYD3Q14802 87 aa12.01□□□□□ -0.49
LSM5-207ENST00000410044 IZUMO4Q1ZYL8 232 aa12.01□□□□□ -0.49
LSM5-207ENST00000410044 GGNBP1Q5YKI7 109 aa12.01□□□□□ -0.49
LSM5-207ENST00000410044 SLC35E3Q7Z769 313 aa12.01□□□□□ -0.49
LSM5-207ENST00000410044 OR4A16Q8NH70 328 aa12.01□□□□□ -0.49
LSM5-207ENST00000410044 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.01□□□□□ -0.49
LSM5-207ENST00000410044 SERTAD4Q9NUC0 356 aa12.01□□□□□ -0.49
LSM5-207ENST00000410044 CACFD1Q9UGQ2 172 aa12.01□□□□□ -0.49
LSM5-207ENST00000410044 TEX50A0A1B0GTY4 177 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms