RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 ASPHD1Q5U4P2 390 aa16.14■□□□□ 0.17
VSX1-204ENST00000409958 TMEM229BQ8NBD8 167 aa16.14■□□□□ 0.17
VSX1-204ENST00000409958 SMIM4Q8WVI0 70 aa16.14■□□□□ 0.17
VSX1-204ENST00000409958 SRSF12Q8WXF0 261 aaKnown RBP16.14■□□□□ 0.17
VSX1-204ENST00000409958 DUX3Q96PT4 197 aa16.14■□□□□ 0.17
VSX1-204ENST00000409958 MSGN1A6NI15 193 aa16.13■□□□□ 0.17
VSX1-204ENST00000409958 I3L521 148 aa16.13■□□□□ 0.17
VSX1-204ENST00000409958 DUS4LO95620 317 aaKnown RBP16.13■□□□□ 0.17
VSX1-204ENST00000409958 CD74P04233 296 aa16.13■□□□□ 0.17
VSX1-204ENST00000409958 RLN1P04808 185 aa16.13■□□□□ 0.17
VSX1-204ENST00000409958 IGLL1P15814 213 aa16.13■□□□□ 0.17
VSX1-204ENST00000409958 TAS2R19P59542 299 aa16.13■□□□□ 0.17
VSX1-204ENST00000409958 ARRDC1Q8N5I2 433 aa16.13■□□□□ 0.17
VSX1-204ENST00000409958 OR5T1Q8NG75 326 aa16.13■□□□□ 0.17
VSX1-204ENST00000409958 CASTOR1Q8WTX7 329 aa16.13■□□□□ 0.17
VSX1-204ENST00000409958 PHB2Q99623 299 aa16.13■□□□□ 0.17
VSX1-204ENST00000409958 RSRP1Q9BUV0 290 aa16.13■□□□□ 0.17
VSX1-204ENST00000409958 TINAGL1Q9GZM7 467 aaPredicted RBP16.13■□□□□ 0.17
VSX1-204ENST00000409958 PLEKHA2Q9HB19 425 aa16.13■□□□□ 0.17
VSX1-204ENST00000409958 BRI3O95415 125 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 NQO2P16083 231 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 F2RP25116 425 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 S100GP29377 79 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 MAS1LP35410 378 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 TPPP2P59282 170 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 FHL3Q13643 280 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 POU2AF1Q16633 256 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 SSX9Q7RTT3 188 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 LHFPL1Q86WI0 220 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 SLC38A6Q8IZM9 456 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 OR4A5Q8NH83 315 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 MS4A10Q96PG2 267 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 SPIN2AQ99865 258 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 SPIN2BQ9BPZ2 258 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 BET1LQ9NYM9 111 aa16.12■□□□□ 0.17
VSX1-204ENST00000409958 TNFSF8P32971 234 aa16.11■□□□□ 0.17
VSX1-204ENST00000409958 OR11H1Q8NG94 326 aa16.11■□□□□ 0.17
VSX1-204ENST00000409958 DGCR14Q96DF8 476 aaKnown RBP16.11■□□□□ 0.17
VSX1-204ENST00000409958 OR5B12Q96R08 314 aa16.11■□□□□ 0.17
VSX1-204ENST00000409958 SOSTQ9BQB4 213 aa16.11■□□□□ 0.17
VSX1-204ENST00000409958 ZNF355PQ9NSJ1 428 aa16.11■□□□□ 0.17
VSX1-204ENST00000409958 COMMD9Q9P000 198 aa16.11■□□□□ 0.17
VSX1-204ENST00000409958 S1PR2O95136 353 aa16.1■□□□□ 0.17
VSX1-204ENST00000409958 RAB3DO95716 219 aa16.1■□□□□ 0.17
VSX1-204ENST00000409958 TRGV3P03979 118 aa16.1■□□□□ 0.17
VSX1-204ENST00000409958 PHLDA2Q53GA4 152 aa16.1■□□□□ 0.17
VSX1-204ENST00000409958 C10orf55Q5SWW7 151 aa16.1■□□□□ 0.17
VSX1-204ENST00000409958 OR4A47Q6IF82 309 aa16.1■□□□□ 0.17
VSX1-204ENST00000409958 STEAP1BQ6NZ63 245 aa16.1■□□□□ 0.17
VSX1-204ENST00000409958 MCRIP2Q9BUT9 160 aaKnown RBP16.1■□□□□ 0.17
VSX1-204ENST00000409958 FABP12A6NFH5 140 aa16.09■□□□□ 0.17
VSX1-204ENST00000409958 MPPED1O15442 326 aa16.09■□□□□ 0.17
VSX1-204ENST00000409958 GSTZ1O43708 216 aaPredicted RBP16.09■□□□□ 0.17
VSX1-204ENST00000409958 LGALS1P09382 135 aaKnown RBP16.09■□□□□ 0.17
VSX1-204ENST00000409958 OR9G9P0C7N8 305 aa16.09■□□□□ 0.17
VSX1-204ENST00000409958 RPL8P62917 257 aaKnown RBP16.09■□□□□ 0.17
VSX1-204ENST00000409958 ADAD2Q8NCV1 583 aaKnown RBP16.09■□□□□ 0.17
VSX1-204ENST00000409958 OR4D10Q8NGI6 311 aa16.09■□□□□ 0.17
VSX1-204ENST00000409958 OR1N2Q8NGR9 330 aa16.09■□□□□ 0.17
VSX1-204ENST00000409958 GPR61Q9BZJ8 451 aa16.09■□□□□ 0.17
VSX1-204ENST00000409958 HRASLSQ9HDD0 168 aa16.09■□□□□ 0.17
VSX1-204ENST00000409958 FAM212BQ9NTI7 297 aaPredicted RBP16.09■□□□□ 0.17
VSX1-204ENST00000409958 IL6RP08887 468 aaPredicted RBP16.08■□□□□ 0.16
VSX1-204ENST00000409958 OR8U8P0C7N1 319 aa16.08■□□□□ 0.16
VSX1-204ENST00000409958 APELAP0DMC3 54 aa16.08■□□□□ 0.16
VSX1-204ENST00000409958 RPL27AP46776 148 aaKnown RBP16.08■□□□□ 0.16
VSX1-204ENST00000409958 RAB25P57735 213 aa16.08■□□□□ 0.16
VSX1-204ENST00000409958 ZNF616Q08AN1 781 aa16.08■□□□□ 0.16
VSX1-204ENST00000409958 MEF2DQ14814 521 aa16.08■□□□□ 0.16
VSX1-204ENST00000409958 ZNF585BQ52M93 769 aa16.08■□□□□ 0.16
VSX1-204ENST00000409958 TBC1D26Q86UD7 250 aa16.08■□□□□ 0.16
VSX1-204ENST00000409958 ZNF486Q96H40 463 aaPredicted RBP16.08■□□□□ 0.16
VSX1-204ENST00000409958 COA4Q9NYJ1 87 aa16.08■□□□□ 0.16
VSX1-204ENST00000409958 A0A0G2JLM5 398 aa16.07■□□□□ 0.16
VSX1-204ENST00000409958 FGF2P09038 288 aa16.07■□□□□ 0.16
VSX1-204ENST00000409958 PGAM2P15259 253 aa16.07■□□□□ 0.16
VSX1-204ENST00000409958 HLA-GP17693 338 aa16.07■□□□□ 0.16
VSX1-204ENST00000409958 LPAR6P43657 344 aa16.07■□□□□ 0.16
VSX1-204ENST00000409958 ERVK-16P61578 105 aa16.07■□□□□ 0.16
VSX1-204ENST00000409958 TTC9CQ8N5M4 171 aa16.07■□□□□ 0.16
VSX1-204ENST00000409958 DMBX1Q8NFW5 382 aa16.07■□□□□ 0.16
VSX1-204ENST00000409958 TERB2Q8NHR7 220 aa16.07■□□□□ 0.16
VSX1-204ENST00000409958 DPF1Q92782 380 aa16.07■□□□□ 0.16
VSX1-204ENST00000409958 SLC2A9Q9NRM0 540 aa16.07■□□□□ 0.16
VSX1-204ENST00000409958 TMEM140Q9NV12 185 aa16.07■□□□□ 0.16
VSX1-204ENST00000409958 MARCH11A6NNE9 402 aa16.06■□□□□ 0.16
VSX1-204ENST00000409958 TEX22C9J3V5 150 aa16.06■□□□□ 0.16
VSX1-204ENST00000409958 UPK2O00526 184 aa16.06■□□□□ 0.16
VSX1-204ENST00000409958 IGHV3-11P01762 117 aa16.06■□□□□ 0.16
VSX1-204ENST00000409958 ZNF735P0CB33 412 aa16.06■□□□□ 0.16
VSX1-204ENST00000409958 S100A5P33763 92 aa16.06■□□□□ 0.16
VSX1-204ENST00000409958 RND3P61587 244 aa16.06■□□□□ 0.16
VSX1-204ENST00000409958 FOXB2Q5VYV0 432 aa16.06■□□□□ 0.16
VSX1-204ENST00000409958 SLC25A42Q86VD7 318 aa16.06■□□□□ 0.16
VSX1-204ENST00000409958 CADM3Q8N126 398 aa16.06■□□□□ 0.16
VSX1-204ENST00000409958 ALX4Q9H161 411 aaPredicted RBP16.06■□□□□ 0.16
VSX1-204ENST00000409958 C13orf42A0A1B0GVH6 325 aa16.05■□□□□ 0.16
VSX1-204ENST00000409958 E7EUB6 86 aa16.05■□□□□ 0.16
VSX1-204ENST00000409958 AKAIN1P0CW23 69 aa16.05■□□□□ 0.16
VSX1-204ENST00000409958 SCGB2B2Q4G0G5 96 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms