RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 RPUSD4Q96CM3 377 aaKnown RBP16.4■□□□□ 0.22
LIMS2-207ENST00000409808 NEIL1Q96FI4 390 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-207ENST00000409808 OR4F4Q96R69 305 aa16.4■□□□□ 0.22
LIMS2-207ENST00000409808 KLF3P57682 345 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-207ENST00000409808 RPP30P78346 268 aaKnown RBP16.39■□□□□ 0.21
LIMS2-207ENST00000409808 BSPH1Q075Z2 132 aa16.39■□□□□ 0.21
LIMS2-207ENST00000409808 COA6Q5JTJ3 125 aaKnown RBP16.39■□□□□ 0.21
LIMS2-207ENST00000409808 MRGPRDQ8TDS7 321 aa16.39■□□□□ 0.21
LIMS2-207ENST00000409808 PRDM13Q9H4Q3 707 aa16.39■□□□□ 0.21
LIMS2-207ENST00000409808 ACACBO00763 2458 aa16.39■□□□□ 0.21
LIMS2-207ENST00000409808 PPP5D1E7EU14 171 aa16.39■□□□□ 0.21
LIMS2-207ENST00000409808 HRASP01112 189 aa16.39■□□□□ 0.21
LIMS2-207ENST00000409808 IGHV3-13P01766 116 aa16.39■□□□□ 0.21
LIMS2-207ENST00000409808 SRP14P37108 136 aaKnown RBP16.39■□□□□ 0.21
LIMS2-207ENST00000409808 FAM3BP58499 235 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-207ENST00000409808 MZT1Q08AG7 82 aa16.39■□□□□ 0.21
LIMS2-207ENST00000409808 CDSNQ15517 529 aa16.39■□□□□ 0.21
LIMS2-207ENST00000409808 SMIM21Q3B7S5 101 aa16.39■□□□□ 0.21
LIMS2-207ENST00000409808 AARDQ4LEZ3 155 aa16.39■□□□□ 0.21
LIMS2-207ENST00000409808 C4orf17Q53FE4 359 aa16.39■□□□□ 0.21
LIMS2-207ENST00000409808 TMEM108Q6UXF1 575 aa16.39■□□□□ 0.21
LIMS2-207ENST00000409808 PACRGQ96M98 296 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-207ENST00000409808 TRBV23-1A0A0A0MS06 115 aa16.38■□□□□ 0.21
LIMS2-207ENST00000409808 SPINT2O43291 252 aa16.38■□□□□ 0.21
LIMS2-207ENST00000409808 TFF1P04155 84 aa16.38■□□□□ 0.21
LIMS2-207ENST00000409808 PLA2G5P39877 138 aa16.38■□□□□ 0.21
LIMS2-207ENST00000409808 DEFA6Q01524 100 aa16.38■□□□□ 0.21
LIMS2-207ENST00000409808 WDR82Q6UXN9 313 aa16.38■□□□□ 0.21
LIMS2-207ENST00000409808 OR5R1Q8NH85 324 aa16.38■□□□□ 0.21
LIMS2-207ENST00000409808 RNASEH2CQ8TDP1 164 aaKnown RBP16.38■□□□□ 0.21
LIMS2-207ENST00000409808 RBMXL2O75526 392 aaKnown RBP16.37■□□□□ 0.21
LIMS2-207ENST00000409808 GRNP28799 593 aaKnown RBP16.37■□□□□ 0.21
LIMS2-207ENST00000409808 PDZD11Q5EBL8 140 aa16.37■□□□□ 0.21
LIMS2-207ENST00000409808 RAB1CQ92928 201 aa16.37■□□□□ 0.21
LIMS2-207ENST00000409808 ACY3Q96HD9 319 aa16.37■□□□□ 0.21
LIMS2-207ENST00000409808 BTF3L4Q96K17 158 aa16.37■□□□□ 0.21
LIMS2-207ENST00000409808 HIST1H2BLQ99880 126 aa16.37■□□□□ 0.21
LIMS2-207ENST00000409808 DVL1O14640 695 aa16.37■□□□□ 0.21
LIMS2-207ENST00000409808 SPRY3O43610 288 aa16.37■□□□□ 0.21
LIMS2-207ENST00000409808 TFF3Q07654 80 aa16.37■□□□□ 0.21
LIMS2-207ENST00000409808 SNX22Q96L94 193 aa16.37■□□□□ 0.21
LIMS2-207ENST00000409808 A0A1B0GWJ7 208 aa16.36■□□□□ 0.21
LIMS2-207ENST00000409808 PDE6DO43924 150 aa16.36■□□□□ 0.21
LIMS2-207ENST00000409808 MPDU1O75352 247 aa16.36■□□□□ 0.21
LIMS2-207ENST00000409808 CDC34P49427 236 aaPredicted RBP16.36■□□□□ 0.21
LIMS2-207ENST00000409808 PKIAP61925 76 aa16.36■□□□□ 0.21
LIMS2-207ENST00000409808 ADORA2A-AS1P86434 159 aa16.36■□□□□ 0.21
LIMS2-207ENST00000409808 BTNL3Q6UXE8 466 aa16.36■□□□□ 0.21
LIMS2-207ENST00000409808 ZDHHC16Q969W1 377 aa16.36■□□□□ 0.21
LIMS2-207ENST00000409808 WDR83OSQ9Y284 106 aa16.36■□□□□ 0.21
LIMS2-207ENST00000409808 IGLV3-9A0A075B6K5 115 aa16.36■□□□□ 0.21
LIMS2-207ENST00000409808 IFNA10P01566 189 aa16.36■□□□□ 0.21
LIMS2-207ENST00000409808 GYPAP02724 150 aa16.36■□□□□ 0.21
LIMS2-207ENST00000409808 COL10A1Q03692 680 aa16.36■□□□□ 0.21
LIMS2-207ENST00000409808 GAB2Q9UQC2 676 aa16.36■□□□□ 0.21
LIMS2-207ENST00000409808 CACNA1DQ01668 2161 aa16.36■□□□□ 0.21
LIMS2-207ENST00000409808 MARCH11A6NNE9 402 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 HMGB3O15347 200 aaKnown RBP16.35■□□□□ 0.21
LIMS2-207ENST00000409808 PAGE4O60829 102 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 GGCTO75223 188 aaKnown RBP16.35■□□□□ 0.21
LIMS2-207ENST00000409808 TYMSP04818 313 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 SFTPCP11686 197 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 CD99P14209 185 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 C9orf152Q5JTZ5 239 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 OR1P1Q8NH06 330 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 R3HDM4Q96D70 268 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 TXNDC17Q9BRA2 123 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 LINC00473A8K010 186 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 HPRT1P00492 218 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 KCNIP4Q6PIL6 250 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 OR13A1Q8NGR1 328 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 OR2T10Q8NGZ9 312 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 OR52E5Q8NH55 327 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 TMEM170AQ8WVE7 144 aa16.35■□□□□ 0.21
LIMS2-207ENST00000409808 C15orf62A8K5M9 175 aa16.34■□□□□ 0.21
LIMS2-207ENST00000409808 GZMHP20718 246 aa16.34■□□□□ 0.21
LIMS2-207ENST00000409808 CD1BP29016 333 aa16.34■□□□□ 0.21
LIMS2-207ENST00000409808 Q3ZCU0 254 aa16.34■□□□□ 0.21
LIMS2-207ENST00000409808 LINC01560Q8TB33 94 aa16.34■□□□□ 0.21
LIMS2-207ENST00000409808 OR2V2Q96R30 315 aa16.34■□□□□ 0.21
LIMS2-207ENST00000409808 PSG11Q9UQ72 335 aa16.34■□□□□ 0.21
LIMS2-207ENST00000409808 C11orf94C9JXX5 98 aa16.34■□□□□ 0.21
LIMS2-207ENST00000409808 C15orf65H3BRN8 121 aa16.34■□□□□ 0.21
LIMS2-207ENST00000409808 CHRNB4P30926 498 aa16.34■□□□□ 0.21
LIMS2-207ENST00000409808 SPCS3P61009 180 aa16.34■□□□□ 0.21
LIMS2-207ENST00000409808 LCN2P80188 198 aa16.34■□□□□ 0.21
LIMS2-207ENST00000409808 JOSD1Q15040 202 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-207ENST00000409808 CDPF1Q6NVV7 123 aa16.34■□□□□ 0.21
LIMS2-207ENST00000409808 F6UZH7 168 aa16.33■□□□□ 0.2
LIMS2-207ENST00000409808 TSTD3H0UI37 97 aa16.33■□□□□ 0.2
LIMS2-207ENST00000409808 RBFOX2O43251 390 aaKnown RBP eCLIP16.33■□□□□ 0.2
LIMS2-207ENST00000409808 SSTR5P35346 364 aa16.33■□□□□ 0.2
LIMS2-207ENST00000409808 PDLIM4P50479 330 aa16.33■□□□□ 0.2
LIMS2-207ENST00000409808 HNF4GQ14541 408 aa16.33■□□□□ 0.2
LIMS2-207ENST00000409808 FAM53AQ6NSI3 398 aaPredicted RBP16.33■□□□□ 0.2
LIMS2-207ENST00000409808 NUP37Q8NFH4 326 aa16.33■□□□□ 0.2
LIMS2-207ENST00000409808 GATAD1Q8WUU5 269 aa16.33■□□□□ 0.2
LIMS2-207ENST00000409808 IMMP2LQ96T52 175 aa16.33■□□□□ 0.2
LIMS2-207ENST00000409808 OR6C3Q9NZP0 311 aa16.33■□□□□ 0.2
LIMS2-207ENST00000409808 TMPRSS2O15393 492 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms