RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 LURAP1Q96LR2 239 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 GAFA1Q96PS6 74 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 RPUSD1Q9UJJ7 312 aaKnown RBP9.43□□□□□ -0.9
SNX13-202ENST00000409604 IGLV1-44P01699 117 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 FAM166AQ6J272 317 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 OR2T6Q8NHC8 308 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 TMEM133Q9H2Q1 129 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 RBKSQ9H477 322 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 CGB1A6NKQ9 187 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 BCL2L11O43521 198 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 GOSR1O95249 250 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 CD74P04233 296 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 TRAPPC2P0DI81 140 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 TRAPPC2BP0DI82 140 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 GATA2P23769 480 aaPredicted RBP9.43□□□□□ -0.9
SNX13-202ENST00000409604 RPL30P62888 115 aaKnown RBP9.43□□□□□ -0.9
SNX13-202ENST00000409604 MIDNQ504T8 468 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 LFNGQ8NES3 379 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 OR4C13Q8NGP0 309 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 SGK494Q96LW2 274 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 H0Y980 276 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 SCO1O75880 301 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 OR2A4O95047 310 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 USF1P22415 310 aaPredicted RBP9.42□□□□□ -0.9
SNX13-202ENST00000409604 BTCP35070 178 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 RND2P52198 227 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 H1FOOQ8IZA3 346 aaPredicted RBP9.42□□□□□ -0.9
SNX13-202ENST00000409604 TMEM252Q8N6L7 170 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 NUP37Q8NFH4 326 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 OR2A7Q96R45 310 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 DMRTA2Q96SC8 542 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 LPAR3Q9UBY5 353 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 MLXQ9UH92 298 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 MSGN1A6NI15 193 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 OR2J3O76001 311 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 Q6P435 159 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 SLC24A4Q8NFF2 622 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 GINS3Q9BRX5 216 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 PRNDQ9UKY0 176 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 TCF19Q9Y242 345 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 TRBV6-7A0A0A0MS04 114 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 BTN1A1Q13410 526 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 VMO1Q7Z5L0 202 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 CENPVQ7Z7K6 275 aaPredicted RBP9.42□□□□□ -0.9
SNX13-202ENST00000409604 TCTE3Q8IZS6 198 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 SCARB1Q8WTV0 552 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 LOC400499M0QZD8 3231 aa9.42□□□□□ -0.9
SNX13-202ENST00000409604 MOSP00540 346 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 HOXD11P31277 338 aaPredicted RBP9.41□□□□□ -0.9
SNX13-202ENST00000409604 TMEM187Q14656 261 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 ZNF329Q86UD4 541 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 RNF166Q96A37 237 aaPredicted RBP9.41□□□□□ -0.9
SNX13-202ENST00000409604 C1orf147Q96MC9 270 aaPredicted RBP9.41□□□□□ -0.9
SNX13-202ENST00000409604 RABAC1Q9UI14 185 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 CHD6Q8TD26 2715 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 LDLRAD4O15165 306 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 SPINK4O60575 86 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 CXCL2P19875 107 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 MC5RP33032 325 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 QRFPP83859 136 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 OR8I2Q8N0Y5 310 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 OR10W1Q8NGF6 305 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 CLDND2Q8NHS1 167 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 FKBP11Q9NYL4 201 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 THYN1Q9P016 225 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 KBTBD11O94819 623 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 CD55P08174 381 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 PSMB3P49720 205 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 FHITP49789 147 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 OR4A47Q6IF82 309 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 OR4X1Q8NH49 305 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 GNPNAT1Q96EK6 184 aaPredicted RBP9.41□□□□□ -0.9
SNX13-202ENST00000409604 DAZAP1Q96EP5 407 aaKnown RBP9.41□□□□□ -0.9
SNX13-202ENST00000409604 F8P00451 2351 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 ALX3O95076 343 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 CDS2O95674 445 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 OR10J1P30954 320 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 ATMQ13315 3056 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 HERPUD1Q15011 391 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 PEA15Q15121 130 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 OR10G4Q8NGN3 311 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 OR10G9Q8NGN4 311 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 OR10G7Q8NGN6 311 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 TMEM186Q96B77 213 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 ACTR3CQ9C0K3 210 aaPredicted RBP9.41□□□□□ -0.9
SNX13-202ENST00000409604 MMP24Q9Y5R2 645 aa9.41□□□□□ -0.9
SNX13-202ENST00000409604 LY86O95711 162 aa9.4□□□□□ -0.9
SNX13-202ENST00000409604 LOXL3P58215 753 aa9.4□□□□□ -0.9
SNX13-202ENST00000409604 PJVKQ0ZLH3 352 aa9.4□□□□□ -0.9
SNX13-202ENST00000409604 DIAPH2-AS1Q14236 149 aa9.4□□□□□ -0.9
SNX13-202ENST00000409604 ACOT6Q3I5F7 207 aaPredicted RBP9.4□□□□□ -0.9
SNX13-202ENST00000409604 ZNF66Q6ZN08 573 aa9.4□□□□□ -0.9
SNX13-202ENST00000409604 ZNF788Q6ZQV5 615 aa9.4□□□□□ -0.9
SNX13-202ENST00000409604 ZBTB34Q8NCN2 500 aa9.4□□□□□ -0.9
SNX13-202ENST00000409604 OR4P4Q8NGL7 312 aa9.4□□□□□ -0.9
SNX13-202ENST00000409604 TRAV3A0A0B4J244 114 aa9.4□□□□□ -0.9
SNX13-202ENST00000409604 FBP1P09467 338 aa9.4□□□□□ -0.9
SNX13-202ENST00000409604 KIR2DS2P43631 304 aa9.4□□□□□ -0.9
SNX13-202ENST00000409604 ZNF324BQ6AW86 544 aaPredicted RBP9.4□□□□□ -0.9
SNX13-202ENST00000409604 TEX261Q6UWH6 196 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms