RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 IDO2Q6ZQW0 420 aa11.15□□□□□ -0.62
NIF3L1-205ENST00000409588 GVQW1Q8N7I0 195 aa11.15□□□□□ -0.62
NIF3L1-205ENST00000409588 OR9G4Q8NGQ1 327 aa11.15□□□□□ -0.62
NIF3L1-205ENST00000409588 OR13F1Q8NGS4 319 aa11.15□□□□□ -0.62
NIF3L1-205ENST00000409588 TAS2R8Q9NYW2 309 aa11.15□□□□□ -0.62
NIF3L1-205ENST00000409588 U3KQK5 164 aa11.15□□□□□ -0.62
NIF3L1-205ENST00000409588 NPIPB5A8MRT5 1133 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 HPRT1P00492 218 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 SPNP16150 400 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 TAS2R31P59538 309 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 TAS2R46P59540 309 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 DYRK1AQ13627 763 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 RPEL1Q2QD12 228 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 TMEM69Q5SWH9 247 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 CADM3Q8N126 398 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 SECTM1Q8WVN6 248 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 SLC25A46Q96AG3 418 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 SLC5A7Q9GZV3 580 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 IFT46Q9NQC8 304 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 CCL28Q9NRJ3 127 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 SLC2A9Q9NRM0 540 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 BET1LQ9NYM9 111 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 PEMTQ9UBM1 199 aa11.14□□□□□ -0.63
NIF3L1-205ENST00000409588 ANKRD34BA5PLL1 514 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 DPPA5A6NC42 116 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 TRIM64CA6NLI5 447 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 CRYGCP07315 174 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 ZNF735P0CB33 412 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 HIST1H1BP16401 226 aaKnown RBP11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 NAT1P18440 290 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 PRSS3P35030 304 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 BRWD1-AS2P59051 145 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 RPL8P62917 257 aaKnown RBP11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 RHOGP84095 191 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 POU2AF1Q16633 256 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 KLK9Q2XQG4 91 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 SPAG16Q8N0X2 631 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 SAMD12Q8N8I0 201 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 SRSF8Q9BRL6 282 aaKnown RBP11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 PLEKHA2Q9HB19 425 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 ADAM30Q9UKF2 790 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 KLK9Q9UKQ9 250 aa11.13□□□□□ -0.63
NIF3L1-205ENST00000409588 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.12□□□□□ -0.63
NIF3L1-205ENST00000409588 A8MZ25 164 aa11.12□□□□□ -0.63
NIF3L1-205ENST00000409588 APOA1P02647 267 aa11.12□□□□□ -0.63
NIF3L1-205ENST00000409588 NQO2P16083 231 aa11.12□□□□□ -0.63
NIF3L1-205ENST00000409588 RPL27AP46776 148 aaKnown RBP11.12□□□□□ -0.63
NIF3L1-205ENST00000409588 HERV-K104P61576 105 aa11.12□□□□□ -0.63
NIF3L1-205ENST00000409588 C11orf87Q6NUJ2 197 aa11.12□□□□□ -0.63
NIF3L1-205ENST00000409588 LPCAT3Q6P1A2 487 aa11.12□□□□□ -0.63
NIF3L1-205ENST00000409588 CMTM1Q8IZ96 169 aa11.12□□□□□ -0.63
NIF3L1-205ENST00000409588 OR2K2Q8NGT1 345 aa11.12□□□□□ -0.63
NIF3L1-205ENST00000409588 AKIP1Q9NQ31 210 aa11.12□□□□□ -0.63
NIF3L1-205ENST00000409588 ANAPC10Q9UM13 185 aa11.12□□□□□ -0.63
NIF3L1-205ENST00000409588 TENM3Q9P273 2699 aa11.12□□□□□ -0.63
NIF3L1-205ENST00000409588 TNCP24821 2201 aa11.11□□□□□ -0.63
NIF3L1-205ENST00000409588 CYB5BO43169 146 aa11.11□□□□□ -0.63
NIF3L1-205ENST00000409588 HLA-GP17693 338 aa11.11□□□□□ -0.63
NIF3L1-205ENST00000409588 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
NIF3L1-205ENST00000409588 OR2B11Q5JQS5 317 aa11.11□□□□□ -0.63
NIF3L1-205ENST00000409588 THOC7Q6I9Y2 204 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-205ENST00000409588 HSD17B13Q7Z5P4 300 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-205ENST00000409588 VKORC1L1Q8N0U8 176 aa11.11□□□□□ -0.63
NIF3L1-205ENST00000409588 OR6F1Q8NGZ6 308 aa11.11□□□□□ -0.63
NIF3L1-205ENST00000409588 RSRP1Q9BUV0 290 aa11.11□□□□□ -0.63
NIF3L1-205ENST00000409588 SCPEP1Q9HB40 452 aa11.11□□□□□ -0.63
NIF3L1-205ENST00000409588 TEX22C9J3V5 150 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 TPPPO94811 219 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 IL6RP08887 468 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 APELAP0DMC3 54 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 PSMB6P28072 239 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 S100GP29377 79 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 GNRHRP30968 328 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 RORCP51449 518 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 TAS2R20P59543 309 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 ZNF45Q02386 682 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 C15orf32Q32M92 178 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 OR4A47Q6IF82 309 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 LCN12Q6JVE5 192 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 IL34Q6ZMJ4 242 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 ZNF818PQ6ZRF7 136 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 Q8N402 240 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 OR5H2Q8NGV7 314 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 MOB3AQ96BX8 217 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 FYTTD1Q96QD9 318 aaKnown RBP11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 FUNDC2Q9BWH2 189 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 COMMD5Q9GZQ3 224 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 HRASLSQ9HDD0 168 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 FAM212BQ9NTI7 297 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 EHFQ9NZC4 300 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 COMMD9Q9P000 198 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 THYN1Q9P016 225 aa11.1□□□□□ -0.63
NIF3L1-205ENST00000409588 DNAH9Q9NYC9 4486 aa11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 LGALS9O00182 355 aa11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 SULT1C2O00338 296 aa11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 TNFSF12O43508 249 aa11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 GGCTO75223 188 aaKnown RBP11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 DEFA4P12838 97 aa11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 F2RP25116 425 aa11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 FXYD4P59646 89 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms