RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 FAM219AQ8IW50 185 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 SELENOHQ8IZQ5 122 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 OR52B4Q8NGK2 314 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 OR4A5Q8NH83 315 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 RNASE11Q8TAA1 199 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 SEC22AQ96IW7 307 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 RITA1Q96K30 269 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 RASL11BQ9BPW5 248 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 PLSCR3Q9NRY6 295 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 METTL1Q9UBP6 276 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 OR2A4O95047 310 aa13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 SAA1P0DJI8 122 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 VDAC1P21796 283 aa13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 CNTFRP26992 372 aa13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 C5orf64Q2M2E5 130 aa13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 FBLN7Q53RD9 439 aa13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 SSX9Q7RTT3 188 aa13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 H2BFWTQ7Z2G1 175 aa13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 PUSL1Q8N0Z8 303 aaKnown RBP13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 C12orf45Q8N5I9 185 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 FAM71E2Q8N5Q1 922 aa13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 C3orf56Q8N813 242 aa13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 LHFPL5Q8TAF8 219 aa13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 RBMXL1Q96E39 390 aaKnown RBP13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 OR2A7Q96R45 310 aa13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 BET1LQ9NYM9 111 aa13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 TNCP24821 2201 aa13.14□□□□□ -0.31
TSPAN4-208ENST00000409531 GPR137BO60478 399 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 KBTBD11O94819 623 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 OR4A47Q6IF82 309 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 PPP1R27Q86WC6 154 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 VKORC1L1Q8N0U8 176 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 SLC35G3Q8N808 338 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 C5orf56Q8N8D9 126 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 Q8N9W7 124 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 LSM10Q969L4 123 aaKnown RBP13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 TMEM140Q9NV12 185 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 PRR13Q9NZ81 148 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 SIGLEC9Q9Y336 463 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 TMED3Q9Y3Q3 217 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 MMP24Q9Y5R2 645 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 C7orf66A4D0T2 115 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 CHST1O43916 411 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 SNAPC5O75971 98 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 IFNA21P01568 189 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 FGF2P09038 288 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 LIN54Q6MZP7 749 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 MMD2Q8IY49 270 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 TMEM167AQ8TBQ9 72 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 TAF15Q92804 592 aaKnown RBP eCLIP13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 NPFFR1Q9GZQ6 430 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 FBXL15Q9H469 300 aa13.13□□□□□ -0.31
TSPAN4-208ENST00000409531 TENM1Q9UKZ4 2725 aa13.12□□□□□ -0.31
TSPAN4-208ENST00000409531 PLXNB1O43157 2135 aa13.12□□□□□ -0.31
TSPAN4-208ENST00000409531 IGKV1-5P01602 117 aa13.12□□□□□ -0.31
TSPAN4-208ENST00000409531 CRYGBP07316 175 aa13.12□□□□□ -0.31
TSPAN4-208ENST00000409531 LYZL2Q7Z4W2 148 aa13.12□□□□□ -0.31
TSPAN4-208ENST00000409531 UXS1Q8NBZ7 420 aa13.12□□□□□ -0.31
TSPAN4-208ENST00000409531 OR51J1Q9H342 316 aa13.12□□□□□ -0.31
TSPAN4-208ENST00000409531 ALG5Q9Y673 324 aa13.12□□□□□ -0.31
TSPAN4-208ENST00000409531 A0A0B4J293 547 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 A0A1B0GUS0 222 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 DBX1A6NMT0 343 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 SSNA1O43805 119 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 ACTL6BO94805 426 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 NDUFA7O95182 113 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 HLA-DRB1P01911 266 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 IL6RP08887 468 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 HOXB5P09067 269 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 MAS1LP35410 378 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 RPL8P62917 257 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 RELBQ01201 579 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 OR4F5Q8NH21 305 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 OR4A16Q8NH70 328 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 SPIN2AQ99865 258 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 SPIN2BQ9BPZ2 258 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 RANBP3Q9H6Z4 567 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 FKBP11Q9NYL4 201 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 CACFD1Q9UGQ2 172 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 PRNDQ9UKY0 176 aa13.11□□□□□ -0.31
TSPAN4-208ENST00000409531 UPK2O00526 184 aa13.1□□□□□ -0.31
TSPAN4-208ENST00000409531 RBMXL2O75526 392 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-208ENST00000409531 P0C879 139 aa13.1□□□□□ -0.31
TSPAN4-208ENST00000409531 SLC25A6P12236 298 aa13.1□□□□□ -0.31
TSPAN4-208ENST00000409531 PRSS8Q16651 343 aa13.1□□□□□ -0.31
TSPAN4-208ENST00000409531 NMSQ5H8A3 153 aa13.1□□□□□ -0.31
TSPAN4-208ENST00000409531 PRSS22Q9GZN4 317 aa13.1□□□□□ -0.31
TSPAN4-208ENST00000409531 ZNF430Q9H8G1 570 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-208ENST00000409531 TPSG1Q9NRR2 321 aa13.1□□□□□ -0.31
TSPAN4-208ENST00000409531 A0A1B0GU03 582 aa13.09□□□□□ -0.31
TSPAN4-208ENST00000409531 HAX1O00165 279 aa13.09□□□□□ -0.31
TSPAN4-208ENST00000409531 AMY1AP04745 511 aa13.09□□□□□ -0.31
TSPAN4-208ENST00000409531 SULT1A3P0DMM9 295 aa13.09□□□□□ -0.31
TSPAN4-208ENST00000409531 SULT1A4P0DMN0 295 aa13.09□□□□□ -0.31
TSPAN4-208ENST00000409531 MDKP21741 143 aaPredicted RBP13.09□□□□□ -0.31
TSPAN4-208ENST00000409531 GGNBP1Q5YKI7 109 aa13.09□□□□□ -0.31
TSPAN4-208ENST00000409531 THOC7Q6I9Y2 204 aaKnown RBP13.09□□□□□ -0.31
TSPAN4-208ENST00000409531 ZNF562Q6V9R5 426 aa13.09□□□□□ -0.31
TSPAN4-208ENST00000409531 FOXRED2Q8IWF2 684 aa13.09□□□□□ -0.31
TSPAN4-208ENST00000409531 GPR146Q96CH1 333 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms