RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 Q8N9W7 124 aa16.3■□□□□ 0.2
VSX1-203ENST00000409285 OR4A5Q8NH83 315 aa16.3■□□□□ 0.2
VSX1-203ENST00000409285 PRR13Q9NZ81 148 aa16.3■□□□□ 0.2
VSX1-203ENST00000409285 TCF21O43680 179 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 KBTBD11O94819 623 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 OR2A4O95047 310 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 G6PCP35575 357 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 AKR1C2P52895 323 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 C5orf64Q2M2E5 130 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 VKORC1L1Q8N0U8 176 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 DMBX1Q8NFW5 382 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 OR2A7Q96R45 310 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 TMEM140Q9NV12 185 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 SIGLEC9Q9Y336 463 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 TMED3Q9Y3Q3 217 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 MMP24Q9Y5R2 645 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 AMY1AP04745 511 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 NMSQ5H8A3 153 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 PPP1R27Q86WC6 154 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 C12orf45Q8N5I9 185 aaPredicted RBP16.29■□□□□ 0.2
VSX1-203ENST00000409285 TMEM167AQ8TBQ9 72 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 RRNAD1Q96FB5 475 aaKnown RBP16.29■□□□□ 0.2
VSX1-203ENST00000409285 METTL1Q9UBP6 276 aaKnown RBP16.29■□□□□ 0.2
VSX1-203ENST00000409285 ALG5Q9Y673 324 aa16.29■□□□□ 0.2
VSX1-203ENST00000409285 NCBP2LA6PVI3 153 aaKnown RBP16.28■□□□□ 0.2
VSX1-203ENST00000409285 HLA-DRB1P01911 266 aa16.28■□□□□ 0.2
VSX1-203ENST00000409285 LYZL2Q7Z4W2 148 aa16.28■□□□□ 0.2
VSX1-203ENST00000409285 GPR137BO60478 399 aa16.27■□□□□ 0.19
VSX1-203ENST00000409285 UBA52P62987 128 aaKnown RBP16.27■□□□□ 0.19
VSX1-203ENST00000409285 MRGPRG-AS1Q2M3A8 158 aa16.27■□□□□ 0.19
VSX1-203ENST00000409285 SSX9Q7RTT3 188 aa16.27■□□□□ 0.19
VSX1-203ENST00000409285 H2BFWTQ7Z2G1 175 aa16.27■□□□□ 0.19
VSX1-203ENST00000409285 FBXL15Q9H469 300 aa16.27■□□□□ 0.19
VSX1-203ENST00000409285 TPSG1Q9NRR2 321 aa16.27■□□□□ 0.19
VSX1-203ENST00000409285 SLC25A6P12236 298 aa16.26■□□□□ 0.19
VSX1-203ENST00000409285 DUX5Q96PT3 197 aa16.26■□□□□ 0.19
VSX1-203ENST00000409285 RASL11BQ9BPW5 248 aa16.26■□□□□ 0.19
VSX1-203ENST00000409285 OR51J1Q9H342 316 aa16.26■□□□□ 0.19
VSX1-203ENST00000409285 COA4Q9NYJ1 87 aa16.26■□□□□ 0.19
VSX1-203ENST00000409285 A0A0G2JRQ6 117 aa16.25■□□□□ 0.19
VSX1-203ENST00000409285 UPK2O00526 184 aa16.25■□□□□ 0.19
VSX1-203ENST00000409285 HLA-GP17693 338 aa16.25■□□□□ 0.19
VSX1-203ENST00000409285 PLGLAQ15195 96 aa16.25■□□□□ 0.19
VSX1-203ENST00000409285 PRSS8Q16651 343 aa16.25■□□□□ 0.19
VSX1-203ENST00000409285 AARDQ4LEZ3 155 aa16.25■□□□□ 0.19
VSX1-203ENST00000409285 LIN54Q6MZP7 749 aa16.25■□□□□ 0.19
VSX1-203ENST00000409285 FOXRED2Q8IWF2 684 aa16.25■□□□□ 0.19
VSX1-203ENST00000409285 MMD2Q8IY49 270 aa16.25■□□□□ 0.19
VSX1-203ENST00000409285 RNASE11Q8TAA1 199 aaKnown RBP16.25■□□□□ 0.19
VSX1-203ENST00000409285 RANBP3Q9H6Z4 567 aaPredicted RBP16.25■□□□□ 0.19
VSX1-203ENST00000409285 ZNF430Q9H8G1 570 aaPredicted RBP16.25■□□□□ 0.19
VSX1-203ENST00000409285 TNFRSF19Q9NS68 423 aa16.25■□□□□ 0.19
VSX1-203ENST00000409285 MAS1LP35410 378 aa16.24■□□□□ 0.19
VSX1-203ENST00000409285 RELBQ01201 579 aa16.24■□□□□ 0.19
VSX1-203ENST00000409285 NPFFR1Q9GZQ6 430 aa16.24■□□□□ 0.19
VSX1-203ENST00000409285 TMEM14BQ9NUH8 114 aa16.24■□□□□ 0.19
VSX1-203ENST00000409285 C15orf61A6NNL5 157 aa16.23■□□□□ 0.19
VSX1-203ENST00000409285 ADAP1O75689 374 aa16.23■□□□□ 0.19
VSX1-203ENST00000409285 OR9G9P0C7N8 305 aa16.23■□□□□ 0.19
VSX1-203ENST00000409285 RPL8P62917 257 aaKnown RBP16.23■□□□□ 0.19
VSX1-203ENST00000409285 GGNBP1Q5YKI7 109 aa16.23■□□□□ 0.19
VSX1-203ENST00000409285 ZNF429Q86V71 674 aa16.23■□□□□ 0.19
VSX1-203ENST00000409285 PRNDQ9UKY0 176 aa16.23■□□□□ 0.19
VSX1-203ENST00000409285 FOXA2Q9Y261 457 aaPredicted RBP16.23■□□□□ 0.19
VSX1-203ENST00000409285 A0A1B0GU03 582 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 SNAPC5O75971 98 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 IFNA21P01568 189 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 HOXB5P09067 269 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 SSBP2P81877 361 aaPredicted RBP16.22■□□□□ 0.19
VSX1-203ENST00000409285 ZNF562Q6V9R5 426 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 PRIMA1Q86XR5 153 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 GPR146Q96CH1 333 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 SPIN2AQ99865 258 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 SPIN2BQ9BPZ2 258 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 FKBP11Q9NYL4 201 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 CACFD1Q9UGQ2 172 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 ZNF257Q9Y2Q1 563 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 TRAV3A0A0B4J244 114 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 FAM181BA6NEQ2 426 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 TRIM77I1YAP6 450 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 SSNA1O43805 119 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 CA2P00918 260 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 SULT1A3P0DMM9 295 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 SULT1A4P0DMN0 295 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 PJVKQ0ZLH3 352 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 SMCO1Q147U7 214 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 Q6ZRM9 215 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 Q8N2B8 174 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 OR5M8Q8NGP6 311 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 CACNG5Q9UF02 275 aa16.22■□□□□ 0.19
VSX1-203ENST00000409285 IGHV7-81A0A0B4J1V7 117 aa16.21■□□□□ 0.19
VSX1-203ENST00000409285 FCN1O00602 326 aa16.21■□□□□ 0.19
VSX1-203ENST00000409285 IGHG2P01859 326 aa16.21■□□□□ 0.19
VSX1-203ENST00000409285 COMPP49747 757 aaPredicted RBP16.21■□□□□ 0.19
VSX1-203ENST00000409285 BCAP31P51572 246 aa16.21■□□□□ 0.19
VSX1-203ENST00000409285 BLCAPP62952 87 aa16.21■□□□□ 0.19
VSX1-203ENST00000409285 IZUMO4Q1ZYL8 232 aa16.21■□□□□ 0.19
VSX1-203ENST00000409285 UXS1Q8NBZ7 420 aa16.21■□□□□ 0.19
VSX1-203ENST00000409285 OR5B3Q8NH48 314 aa16.21■□□□□ 0.19
VSX1-203ENST00000409285 OR4A16Q8NH70 328 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 337.4 ms