RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 SP6Q3SY56 376 aa16.4■□□□□ 0.22
C4orf48-201ENST00000409248 NRARPQ7Z6K4 114 aa16.4■□□□□ 0.22
C4orf48-201ENST00000409248 NDUFA11Q86Y39 141 aa16.4■□□□□ 0.22
C4orf48-201ENST00000409248 VSTM2AQ8TAG5 236 aa16.4■□□□□ 0.22
C4orf48-201ENST00000409248 TRAV6A0A075B6T7 132 aa16.39■□□□□ 0.21
C4orf48-201ENST00000409248 OPN1MWP04001 364 aa16.39■□□□□ 0.21
C4orf48-201ENST00000409248 SAA1P0DJI8 122 aaPredicted RBP16.39■□□□□ 0.21
C4orf48-201ENST00000409248 OPN1MW2P0DN77 364 aa16.39■□□□□ 0.21
C4orf48-201ENST00000409248 OPN1MW3P0DN78 364 aa16.39■□□□□ 0.21
C4orf48-201ENST00000409248 VAMP1P23763 118 aa16.39■□□□□ 0.21
C4orf48-201ENST00000409248 SLC35B1P78383 322 aa16.39■□□□□ 0.21
C4orf48-201ENST00000409248 TEX45Q8NA69 505 aa16.39■□□□□ 0.21
C4orf48-201ENST00000409248 DMBX1Q8NFW5 382 aa16.39■□□□□ 0.21
C4orf48-201ENST00000409248 R3HDM4Q96D70 268 aa16.39■□□□□ 0.21
C4orf48-201ENST00000409248 RHOVQ96L33 236 aa16.39■□□□□ 0.21
C4orf48-201ENST00000409248 CITED2Q99967 270 aaPredicted RBP16.39■□□□□ 0.21
C4orf48-201ENST00000409248 GON7Q9BXV9 100 aa16.39■□□□□ 0.21
C4orf48-201ENST00000409248 TMEM222Q9H0R3 208 aa16.39■□□□□ 0.21
C4orf48-201ENST00000409248 CREBL2O60519 120 aaPredicted RBP16.38■□□□□ 0.21
C4orf48-201ENST00000409248 ATG12O94817 140 aa16.38■□□□□ 0.21
C4orf48-201ENST00000409248 TSPAN15O95858 294 aa16.38■□□□□ 0.21
C4orf48-201ENST00000409248 HLA-DRB1P01911 266 aa16.38■□□□□ 0.21
C4orf48-201ENST00000409248 H2AFB2P0C5Z0 115 aa16.38■□□□□ 0.21
C4orf48-201ENST00000409248 ANXA7P20073 488 aaKnown RBP16.38■□□□□ 0.21
C4orf48-201ENST00000409248 SUPT4H1P63272 117 aaKnown RBP16.38■□□□□ 0.21
C4orf48-201ENST00000409248 PPP1R1AQ13522 171 aa16.38■□□□□ 0.21
C4orf48-201ENST00000409248 POU2AF1Q16633 256 aa16.38■□□□□ 0.21
C4orf48-201ENST00000409248 LIN54Q6MZP7 749 aa16.38■□□□□ 0.21
C4orf48-201ENST00000409248 PLET1Q6UQ28 207 aa16.38■□□□□ 0.21
C4orf48-201ENST00000409248 SSX9Q7RTT3 188 aa16.38■□□□□ 0.21
C4orf48-201ENST00000409248 VKORC1L1Q8N0U8 176 aa16.38■□□□□ 0.21
C4orf48-201ENST00000409248 STPG2Q8N412 459 aa16.38■□□□□ 0.21
C4orf48-201ENST00000409248 DUSP18Q8NEJ0 188 aa16.38■□□□□ 0.21
C4orf48-201ENST00000409248 MARCH11A6NNE9 402 aa16.37■□□□□ 0.21
C4orf48-201ENST00000409248 OR2A4O95047 310 aa16.37■□□□□ 0.21
C4orf48-201ENST00000409248 SFT2D2O95562 160 aa16.37■□□□□ 0.21
C4orf48-201ENST00000409248 PTTG1O95997 202 aa16.37■□□□□ 0.21
C4orf48-201ENST00000409248 CRYGBP07316 175 aa16.37■□□□□ 0.21
C4orf48-201ENST00000409248 SRPXP78539 464 aa16.37■□□□□ 0.21
C4orf48-201ENST00000409248 C4orf46Q504U0 113 aa16.37■□□□□ 0.21
C4orf48-201ENST00000409248 COMMD1Q8N668 190 aa16.37■□□□□ 0.21
C4orf48-201ENST00000409248 GLYATL2Q8WU03 294 aa16.37■□□□□ 0.21
C4orf48-201ENST00000409248 NOL4LQ96MY1 436 aaPredicted RBP16.37■□□□□ 0.21
C4orf48-201ENST00000409248 OR2A7Q96R45 310 aa16.37■□□□□ 0.21
C4orf48-201ENST00000409248 HSPB9Q9BQS6 159 aa16.37■□□□□ 0.21
C4orf48-201ENST00000409248 KRASP01116 189 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 OR4E1P0C645 316 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 G6PCP35575 357 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 CD83Q01151 205 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 TMEM187Q14656 261 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 NSUN5P1Q3KNT7 163 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 KHDC1LQ5JSQ8 128 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 PPP1R27Q86WC6 154 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 ZNF695Q8IW36 515 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 PUSL1Q8N0Z8 303 aaKnown RBP16.36■□□□□ 0.21
C4orf48-201ENST00000409248 OR4A5Q8NH83 315 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 CLCC1Q96S66 551 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 ALX4Q9H161 411 aaPredicted RBP16.36■□□□□ 0.21
C4orf48-201ENST00000409248 TPSG1Q9NRR2 321 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 TMEM140Q9NV12 185 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 BET1LQ9NYM9 111 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 ZNF580Q9UK33 172 aa16.36■□□□□ 0.21
C4orf48-201ENST00000409248 PIGBOS1A0A0B4J2F0 54 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 TCRBV4S1A1TA0A5B7 111 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 KBTBD11O94819 623 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 CDS2O95674 445 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 IGKV1-39P01597 117 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 HLA-AP01891 365 aaKnown RBP16.35■□□□□ 0.21
C4orf48-201ENST00000409248 IGKV1D-39P04432 117 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 VDAC1P21796 283 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 AKR1C2P52895 323 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 HIST2H2BDQ6DRA6 164 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 OR4A47Q6IF82 309 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 LGI3Q8N145 548 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 OR4F17Q8NGA8 305 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 RNASE11Q8TAA1 199 aaKnown RBP16.35■□□□□ 0.21
C4orf48-201ENST00000409248 CASTOR1Q8WTX7 329 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 RBPMSQ93062 196 aaKnown RBP16.35■□□□□ 0.21
C4orf48-201ENST00000409248 IL22RA2Q969J5 263 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 TMEM56Q96MV1 263 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 OR4F4Q96R69 305 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 LINC00527Q9UJ94 153 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 TSSC4Q9Y5U2 329 aaPredicted RBP16.35■□□□□ 0.21
C4orf48-201ENST00000409248 TMEM56-RWDD3S4R434 201 aa16.35■□□□□ 0.21
C4orf48-201ENST00000409248 CA2P00918 260 aa16.34■□□□□ 0.21
C4orf48-201ENST00000409248 IGF1P05019 195 aa16.34■□□□□ 0.21
C4orf48-201ENST00000409248 MECP2P51608 486 aaKnown RBP16.34■□□□□ 0.21
C4orf48-201ENST00000409248 RAB25P57735 213 aa16.34■□□□□ 0.21
C4orf48-201ENST00000409248 DHRS2Q13268 280 aa16.34■□□□□ 0.21
C4orf48-201ENST00000409248 PRSS8Q16651 343 aa16.34■□□□□ 0.21
C4orf48-201ENST00000409248 RGS21Q2M5E4 152 aa16.34■□□□□ 0.21
C4orf48-201ENST00000409248 TMEM268Q5VZI3 342 aa16.34■□□□□ 0.21
C4orf48-201ENST00000409248 C10orf99Q6UWK7 81 aa16.34■□□□□ 0.21
C4orf48-201ENST00000409248 LYG2Q86SG7 212 aa16.34■□□□□ 0.21
C4orf48-201ENST00000409248 ZNF329Q86UD4 541 aa16.34■□□□□ 0.21
C4orf48-201ENST00000409248 MMD2Q8IY49 270 aa16.34■□□□□ 0.21
C4orf48-201ENST00000409248 CADM3Q8N126 398 aa16.34■□□□□ 0.21
C4orf48-201ENST00000409248 TMEM167AQ8TBQ9 72 aa16.34■□□□□ 0.21
C4orf48-201ENST00000409248 SEC22AQ96IW7 307 aa16.34■□□□□ 0.21
C4orf48-201ENST00000409248 MGAM2Q2M2H8 2515 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms