RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 RPL39P5Q59GN2 51 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 C1orf100Q5SVJ3 147 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 NKAIN3Q8N8D7 197 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 DYNLRB2Q8TF09 96 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 DEDD2Q8WXF8 326 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 WDR89Q96FK6 387 aaPredicted RBP9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 YPEL2Q96QA6 119 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 TINAGL1Q9GZM7 467 aaPredicted RBP9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 DNAH17Q9UFH2 4485 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 A0A1B0GVY2 172 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 INMT-MINDY4F8WBC2 141 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 H7C2Y5 167 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 ST8SIA5O15466 376 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 XRCC3O43542 346 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 RBBP9O75884 186 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 GTF2F2P13984 249 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 ATF4P18848 351 aaPredicted RBP9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 AP3S2P59780 193 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 HTD2P86397 168 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 SLC22A6Q4U2R8 563 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 LY6G6FQ5SQ64 297 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 RAB12Q6IQ22 244 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 OR2AK2Q8NG84 335 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 OR6M1Q8NGM8 313 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 PHLDA1Q8WV24 401 aaPredicted RBP9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 FAM3DQ96BQ1 224 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 ST6GAL2Q96JF0 529 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 SPACA1Q9HBV2 294 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 MRPS7Q9Y2R9 242 aaKnown RBP9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 WASHC3Q9Y3C0 194 aa9.6□□□□□ -0.87
CHRNA1-203ENST00000409219 LOC102724200A0A096LPH7 203 aaPredicted RBP9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 NAP1L6A6NFF2 107 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 BMPR1BO00238 502 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 ZNF93P35789 620 aaPredicted RBP9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 TMEM69Q5SWH9 247 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 SLC16A13Q7RTY0 426 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 ZBTB8BQ8NAP8 495 aaPredicted RBP9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 OR5AN1Q8NGI8 311 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 FCAMRQ8WWV6 532 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 SNAPC3Q92966 411 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 PTX4Q96A99 478 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 S100A13Q99584 98 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 PIPOXQ9P0Z9 390 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 ZNF221Q9UK13 617 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 TP53TG1Q9Y2A0 90 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 HSPG2P98160 4391 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 A0A0A6YYH2 397 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 C7orf66A4D0T2 115 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 A6NJ64 397 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 ZNF780AO75290 641 aaPredicted RBP9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 CA11O75493 328 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 SPDEFO95238 335 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 GSTT2BP0CG30 244 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 HTR2CP28335 458 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 MC5RP33032 325 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 BMI1P35226 326 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 TAS2R20P59543 309 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 SSBP1Q04837 148 aaKnown RBP9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 C2orf76Q3KRA6 126 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 OR52I2Q8NH67 350 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 MRPL30Q8TCC3 161 aaKnown RBP9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 USMG5Q96IX5 58 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 RNF5Q99942 180 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 AUNIPQ9H7T9 357 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 DIABLOQ9NR28 239 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 KCNIP1Q9NZI2 227 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 ALG5Q9Y673 324 aa9.59□□□□□ -0.87
CHRNA1-203ENST00000409219 TMEM272A0A1B0GTI8 110 aa9.58□□□□□ -0.88
CHRNA1-203ENST00000409219 ANKRD20A5PA0PJZ0 165 aa9.58□□□□□ -0.88
CHRNA1-203ENST00000409219 UBE2QL1A1L167 161 aa9.58□□□□□ -0.88
CHRNA1-203ENST00000409219 RAB29O14966 203 aa9.58□□□□□ -0.88
CHRNA1-203ENST00000409219 IGKV1-16P04430 117 aa9.58□□□□□ -0.88
CHRNA1-203ENST00000409219 TCRBP04435 133 aa9.58□□□□□ -0.88
CHRNA1-203ENST00000409219 KIR2DS2P43631 304 aa9.58□□□□□ -0.88
CHRNA1-203ENST00000409219 DEFB135Q30KP9 77 aa9.58□□□□□ -0.88
CHRNA1-203ENST00000409219 CDH26Q8IXH8 852 aa9.58□□□□□ -0.88
CHRNA1-203ENST00000409219 GALMQ96C23 342 aa9.58□□□□□ -0.88
CHRNA1-203ENST00000409219 UQCC2Q9BRT2 126 aa9.58□□□□□ -0.88
CHRNA1-203ENST00000409219 COA4Q9NYJ1 87 aa9.58□□□□□ -0.88
CHRNA1-203ENST00000409219 SELENOKQ9Y6D0 94 aa9.58□□□□□ -0.88
CHRNA1-203ENST00000409219 PKD1P98161 4303 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 C2orf70A6NJV1 201 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 FAM90A23PA8MXZ1 464 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 SPRY2O43597 315 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 DHFRP00374 187 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 FOLR2P14207 255 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 RAB6AP20340 208 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 BDKRB2P30411 391 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 LGALS7P47929 136 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 RRAS2P62070 204 aaPredicted RBP9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 PJVKQ0ZLH3 352 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 PLA2G7Q13093 441 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 CBX3Q13185 183 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 SIGIRRQ6IA17 410 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 Q6ZWC4 215 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 TMEM61Q8N0U2 210 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 ABHD14BQ96IU4 210 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 TSNAXQ99598 290 aaKnown RBP9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 TMEM138Q9NPI0 162 aa9.57□□□□□ -0.88
CHRNA1-203ENST00000409219 MTFP1Q9UDX5 166 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms