RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 FOXQ1Q9C009 403 aa10.47□□□□□ -0.73
SHANK2-203ENST00000409161 IL36BQ9NZH7 164 aa10.47□□□□□ -0.73
SHANK2-203ENST00000409161 APELAP0DMC3 54 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 OR13C6PQ8NH95 151 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 TUBA4BQ9H853 241 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 COL24A1Q17RW2 1714 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 COL5A3P25940 1745 aaPredicted RBP10.46□□□□□ -0.73
SHANK2-203ENST00000409161 PGFP49763 221 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 PRSS41Q7RTY9 318 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 CIARTQ8N365 385 aaPredicted RBP10.46□□□□□ -0.73
SHANK2-203ENST00000409161 FGFRL1Q8N441 504 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 SSTR5P35346 364 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 C1orf100Q5SVJ3 147 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 ZNF488Q96MN9 340 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 ELOVL5Q9NYP7 299 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 TRBV23-1A0A0A0MS06 115 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 TRAV8-2A0A0B4J237 113 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 PAX1P15863 534 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 EFNB2P52799 333 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 PHLDA1Q8WV24 401 aaPredicted RBP10.46□□□□□ -0.73
SHANK2-203ENST00000409161 EEF1AKMT3Q96AZ1 226 aa10.46□□□□□ -0.73
SHANK2-203ENST00000409161 PLNP26678 52 aa10.46□□□□□ -0.74
SHANK2-203ENST00000409161 SELENOHQ8IZQ5 122 aaKnown RBP10.46□□□□□ -0.74
SHANK2-203ENST00000409161 NPIPB13A6NJU9 1138 aa10.46□□□□□ -0.74
SHANK2-203ENST00000409161 NPIPB4C9JG80 1138 aa10.46□□□□□ -0.74
SHANK2-203ENST00000409161 GFRA1P56159 465 aa10.46□□□□□ -0.74
SHANK2-203ENST00000409161 C5orf66Q9H5L9 145 aa10.46□□□□□ -0.74
SHANK2-203ENST00000409161 P2RY4P51582 365 aa10.46□□□□□ -0.74
SHANK2-203ENST00000409161 CLEC2AQ6UVW9 174 aa10.46□□□□□ -0.74
SHANK2-203ENST00000409161 CT55Q8WUE5 264 aa10.46□□□□□ -0.74
SHANK2-203ENST00000409161 hCG_38984A0A1B0GV85 526 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 CBLN1P23435 193 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 ATP5G2Q06055 141 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 TBR1Q16650 682 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 VKORC1L1Q8N0U8 176 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 PGPEP1LA6NFU8 196 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 SEC11AP67812 179 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 ACSF3Q4G176 576 aaPredicted RBP10.45□□□□□ -0.74
SHANK2-203ENST00000409161 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.45□□□□□ -0.74
SHANK2-203ENST00000409161 TNFRSF18Q9Y5U5 241 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 VWA8A3KMH1 1905 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 TRAV8-6A0A0B4J262 113 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 TRBV7-9A0A0J9YWB2 115 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 ERVH48-1M5A8F1 160 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 CEACAM4O75871 244 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 ZFAND6Q6FIF0 208 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 CHODLQ9H9P2 273 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 KIR3DL3Q8N743 410 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 WDYHV1Q96HA8 205 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 LTBP4Q8N2S1 1624 aa10.45□□□□□ -0.74
SHANK2-203ENST00000409161 PGLYRP1O75594 196 aaPredicted RBP10.45□□□□□ -0.74
SHANK2-203ENST00000409161 OTX1P32242 354 aaPredicted RBP10.45□□□□□ -0.74
SHANK2-203ENST00000409161 J3QW42 95 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 MGAT2Q10469 447 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 DXOO77932 396 aaKnown RBP10.44□□□□□ -0.74
SHANK2-203ENST00000409161 MAGEA5P43359 124 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 SCGB3A1Q96QR1 104 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 GRIFINA4D1Z8 144 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 APOMO95445 188 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 PATE4P0C8F1 98 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 CD200R1LQ6Q8B3 271 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 WFDC3Q8IUB2 231 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 ATOH7Q8N100 152 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 TMEM171Q8WVE6 324 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 SLC25A2Q9BXI2 301 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 RNF182Q8N6D2 247 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 AMER3Q8N944 861 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 PRDM13Q9H4Q3 707 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 JPT1Q9UK76 154 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 COL18A1P39060 1754 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 ANAPC1Q9H1A4 1944 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 IGHV3OR15-7A0A075B7D8 119 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 LINC00469Q8N7U9 141 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 TMEM186Q96B77 213 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 OVOL2Q9BRP0 275 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 OR2H2O95918 312 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 ERGP11308 486 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 CRYBB3P26998 211 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 NANOS3P60323 173 aaKnown RBP10.44□□□□□ -0.74
SHANK2-203ENST00000409161 FXYD3Q14802 87 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 NKX2-8O15522 239 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 SYNGR3O43761 229 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 EFNB1P98172 346 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 OPN3Q9H1Y3 402 aaPredicted RBP10.44□□□□□ -0.74
SHANK2-203ENST00000409161 GLI3P10071 1580 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 C1QL1O75973 258 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 GCHFRP30047 84 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 TIMM23BQ5SRD1 257 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 PRDM14Q9GZV8 571 aa10.44□□□□□ -0.74
SHANK2-203ENST00000409161 C2CD4DB7Z1M9 353 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 KLK15Q9H2R5 256 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 ZNF257Q9Y2Q1 563 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 TSPAN7P41732 249 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 MYEOVQ96EZ4 313 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 DENND4AQ7Z401 1863 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 SHANK3Q9BYB0 1731 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 OR4D11Q8NGI4 311 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 ARHGAP21Q5T5U3 1957 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 NPPCP23582 126 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 LIMS1P48059 325 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms