RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 VAX1Q5SQQ9 334 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 PUSL1Q8N0Z8 303 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 TMEM167AQ8TBQ9 72 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 MCRIP2Q9BUT9 160 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 SLIRPQ9GZT3 109 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 H3BUA1 57 aa13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 GABARAPH6UMI1 98 aa13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 IGHV3-11P01762 117 aa13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 PRB2P02812 416 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 TAS2R31P59538 309 aa13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 MRPS10P82664 201 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 DGCR2P98153 550 aa13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 IL18Q14116 193 aa13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 PDLIM3Q53GG5 364 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 FOXB2Q5VYV0 432 aa13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 MCFD2Q8NI22 146 aa13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 DPF1Q92782 380 aa13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 SPIN2AQ99865 258 aa13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 SPIN2BQ9BPZ2 258 aa13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 TINAGL1Q9GZM7 467 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 COA4Q9NYJ1 87 aa13.92□□□□□ -0.18
PDLIM2-206ENST00000409141 NQO2P16083 231 aa13.91□□□□□ -0.18
PDLIM2-206ENST00000409141 S100GP29377 79 aa13.91□□□□□ -0.18
PDLIM2-206ENST00000409141 ZNF616Q08AN1 781 aa13.91□□□□□ -0.18
PDLIM2-206ENST00000409141 FHL3Q13643 280 aa13.91□□□□□ -0.18
PDLIM2-206ENST00000409141 PHLDA2Q53GA4 152 aa13.91□□□□□ -0.18
PDLIM2-206ENST00000409141 C10orf55Q5SWW7 151 aa13.91□□□□□ -0.18
PDLIM2-206ENST00000409141 RSRP1Q9BUV0 290 aa13.91□□□□□ -0.18
PDLIM2-206ENST00000409141 GPR61Q9BZJ8 451 aa13.91□□□□□ -0.18
PDLIM2-206ENST00000409141 ALX4Q9H161 411 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-206ENST00000409141 PLEKHA2Q9HB19 425 aa13.91□□□□□ -0.18
PDLIM2-206ENST00000409141 HRASLSQ9HDD0 168 aa13.91□□□□□ -0.18
PDLIM2-206ENST00000409141 RABL2AQ9UBK7 228 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-206ENST00000409141 RABL2BQ9UNT1 228 aa13.91□□□□□ -0.18
PDLIM2-206ENST00000409141 LGALS1P09382 135 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-206ENST00000409141 OR8U8P0C7N1 319 aa13.9□□□□□ -0.18
PDLIM2-206ENST00000409141 TBPP20226 339 aa13.9□□□□□ -0.18
PDLIM2-206ENST00000409141 F2RP25116 425 aa13.9□□□□□ -0.18
PDLIM2-206ENST00000409141 MAS1LP35410 378 aa13.9□□□□□ -0.18
PDLIM2-206ENST00000409141 UCP3P55916 312 aa13.9□□□□□ -0.18
PDLIM2-206ENST00000409141 OR4A47Q6IF82 309 aa13.9□□□□□ -0.18
PDLIM2-206ENST00000409141 TMEM229BQ8NBD8 167 aa13.9□□□□□ -0.18
PDLIM2-206ENST00000409141 OR4A5Q8NH83 315 aa13.9□□□□□ -0.18
PDLIM2-206ENST00000409141 DGCR14Q96DF8 476 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-206ENST00000409141 BET1LQ9NYM9 111 aa13.9□□□□□ -0.18
PDLIM2-206ENST00000409141 C13orf42A0A1B0GVH6 325 aa13.89□□□□□ -0.19
PDLIM2-206ENST00000409141 S1PR2O95136 353 aa13.89□□□□□ -0.19
PDLIM2-206ENST00000409141 OR9G9P0C7N8 305 aa13.89□□□□□ -0.19
PDLIM2-206ENST00000409141 LPAR6P43657 344 aa13.89□□□□□ -0.19
PDLIM2-206ENST00000409141 RPL27AP46776 148 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-206ENST00000409141 TAS2R19P59542 299 aa13.89□□□□□ -0.19
PDLIM2-206ENST00000409141 RPL8P62917 257 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-206ENST00000409141 SSBP1Q04837 148 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-206ENST00000409141 SLC38A6Q8IZM9 456 aa13.89□□□□□ -0.19
PDLIM2-206ENST00000409141 ARRDC1Q8N5I2 433 aa13.89□□□□□ -0.19
PDLIM2-206ENST00000409141 DMBX1Q8NFW5 382 aa13.89□□□□□ -0.19
PDLIM2-206ENST00000409141 RSL24D1Q9UHA3 163 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-206ENST00000409141 A0A0G2JLM5 398 aa13.88□□□□□ -0.19
PDLIM2-206ENST00000409141 BRI3O95415 125 aa13.88□□□□□ -0.19
PDLIM2-206ENST00000409141 CD74P04233 296 aa13.88□□□□□ -0.19
PDLIM2-206ENST00000409141 RPA2P15927 270 aa13.88□□□□□ -0.19
PDLIM2-206ENST00000409141 TNFSF8P32971 234 aa13.88□□□□□ -0.19
PDLIM2-206ENST00000409141 ADAD2Q8NCV1 583 aaKnown RBP13.88□□□□□ -0.19
PDLIM2-206ENST00000409141 SMIM4Q8WVI0 70 aa13.88□□□□□ -0.19
PDLIM2-206ENST00000409141 FYTTD1Q96QD9 318 aaKnown RBP13.88□□□□□ -0.19
PDLIM2-206ENST00000409141 NXF2Q9GZY0 626 aaKnown RBP13.88□□□□□ -0.19
PDLIM2-206ENST00000409141 COMMD9Q9P000 198 aa13.88□□□□□ -0.19
PDLIM2-206ENST00000409141 HMX3A6NHT5 357 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 LINC01619G3V211 115 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 CTDSPLO15194 276 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 RAB3DO95716 219 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 IL6RP08887 468 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 PGAM2P15259 253 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 HLA-GP17693 338 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 HOXD3P31249 432 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 POU2AF1Q16633 256 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 STEAP1BQ6NZ63 245 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 REC114Q7Z4M0 266 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 TBC1D26Q86UD7 250 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 TTC9CQ8N5M4 171 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 OR4D10Q8NGI6 311 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 RBM38Q9H0Z9 239 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 TMEM140Q9NV12 185 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 TRAV3A0A0B4J244 114 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 DPPA5A6NC42 116 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 FABP12A6NFH5 140 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 UPK2O00526 184 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 HSPB1P04792 205 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 ERVK-16P61578 105 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 SCGB2B2Q4G0G5 96 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 ZNF585BQ52M93 769 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 SLC25A42Q86VD7 318 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 LHFPL1Q86WI0 220 aa13.87□□□□□ -0.19
PDLIM2-206ENST00000409141 IGHV4OR15-8A0A075B7B6 117 aa13.86□□□□□ -0.19
PDLIM2-206ENST00000409141 A0A087WW49 117 aa13.86□□□□□ -0.19
PDLIM2-206ENST00000409141 MARCH11A6NNE9 402 aa13.86□□□□□ -0.19
PDLIM2-206ENST00000409141 TEX22C9J3V5 150 aa13.86□□□□□ -0.19
PDLIM2-206ENST00000409141 E7EUB6 86 aa13.86□□□□□ -0.19
PDLIM2-206ENST00000409141 KRASP01116 189 aa13.86□□□□□ -0.19
PDLIM2-206ENST00000409141 ZNF735P0CB33 412 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms