RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ANKRD34BA5PLL1 514 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 NPIPB5A8MRT5 1133 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 HPRT1P00492 218 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 NQO2P16083 231 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 HLA-GP17693 338 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 FXYD4P59646 89 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 RPL30P62888 115 aaKnown RBP6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 DYRK1AQ13627 763 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 AADACL3Q5VUY0 350 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 HSD17B13Q7Z5P4 300 aaPredicted RBP6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 GTSCR1Q86UQ5 136 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 PUSL1Q8N0Z8 303 aaKnown RBP6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 Q8N402 240 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 GVQW1Q8N7I0 195 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 OR5H2Q8NGV7 314 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 AP3S1Q92572 193 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 YIPF6Q96EC8 236 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 SRSF8Q9BRL6 282 aaKnown RBP6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 COMMD5Q9GZQ3 224 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 RNF167Q9H6Y7 350 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 ZMAT4Q9H898 229 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 PLEKHA2Q9HB19 425 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 SCPEP1Q9HB40 452 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 HRASLSQ9HDD0 168 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 CCL28Q9NRJ3 127 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 EHFQ9NZC4 300 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 COMMD9Q9P000 198 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 THYN1Q9P016 225 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 DNAH9Q9NYC9 4486 aa6.97□□□□□ -1.29
SNORD88A-201ENST00000408314 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 IGLV2-14P01704 120 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 APOA1P02647 267 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 ZNF735P0CB33 412 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 APELAP0DMC3 54 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 DEFA4P12838 97 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 PRSS3P35030 304 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 RPS19P39019 145 aaKnown RBP6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 SYNJ2BPP57105 145 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 TAS2R20P59543 309 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 EIF4EBP1Q13541 118 aaPredicted RBP6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 POU2AF1Q16633 256 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 MRGPRG-AS1Q2M3A8 158 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 LPCAT3Q6P1A2 487 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 MZT2AQ6P582 158 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 TMEM17Q86X19 198 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 LAX1Q8IWV1 398 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 DMBX1Q8NFW5 382 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 SLC25A46Q96AG3 418 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 CXorf58Q96LI9 332 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 FYTTD1Q96QD9 318 aaKnown RBP6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 AKIP1Q9NQ31 210 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 SLC2A9Q9NRM0 540 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 TNCP24821 2201 aa6.96□□□□□ -1.3
SNORD88A-201ENST00000408314 COL7A1Q02388 2944 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 SULT1C2O00338 296 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 TNFSF12O43508 249 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 GGCTO75223 188 aaKnown RBP6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 NAT1P18440 290 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 PSMB6P28072 239 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 RCVRNP35243 200 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 LSM3P62310 102 aaKnown RBP6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 C15orf32Q32M92 178 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 C10orf55Q5SWW7 151 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 OR4A47Q6IF82 309 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 DHRS11Q6UWP2 260 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 SSX9Q7RTT3 188 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 VKORC1L1Q8N0U8 176 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 OR6F1Q8NGZ6 308 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 OR51H1Q8NH63 302 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 DYNLRB2Q8TF09 96 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 C15orf40Q8WUR7 153 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 EEF1AKMT3Q96AZ1 226 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 MOB3AQ96BX8 217 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 ZNF2Q9BSG1 426 aaPredicted RBP6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 FAM212BQ9NTI7 297 aaPredicted RBP6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 FBXL7Q9UJT9 491 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 ADAM30Q9UKF2 790 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 ANAPC10Q9UM13 185 aa6.95□□□□□ -1.3
SNORD88A-201ENST00000408314 TENM3Q9P273 2699 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 TRBV7-1A0A0A6YYK4 115 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 HMX3A6NHT5 357 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 TRIM64CA6NLI5 447 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 A8MZ25 164 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 TEX22C9J3V5 150 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 GPR31O00270 319 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 OR2J3O76001 311 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 TPPPO94811 219 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 CRYGCP07315 174 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 FRMD6-AS1P0C7T7 363 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 F2RP25116 425 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 RORCP51449 518 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 TSPAN5P62079 268 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 FAM106AQ4KMX7 169 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 ZNF818PQ6ZRF7 136 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 CADM3Q8N126 398 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 OR1L6Q8NGR2 347 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 TSC22D3Q99576 134 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 ASCL2Q99929 193 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 FUNDC2Q9BWH2 189 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 QTRT1Q9BXR0 403 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms