RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SFT2D1Q8WV19 159 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 IGFBPL1Q8WX77 278 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 S1PR3Q99500 378 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 P2RX4Q99571 388 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 WDR61Q9GZS3 305 aaKnown RBP10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 RPS10P5Q9NQ39 176 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 CBLN4Q9NTU7 201 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 RAI1Q7Z5J4 1906 aaPredicted RBP10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 CEBPZOSA8MTT3 80 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 B9A039 149 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 TSPAN9O75954 239 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 S1PR2O95136 353 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 CD55P08174 381 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 FOLR2P14207 255 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 DUTP33316 252 aaKnown RBP10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 THBS3P49746 956 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 EDDM3BP56851 147 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 SPCS3P61009 180 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 GNB2P62879 340 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 RPL30P62888 115 aaKnown RBP10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 EFNB3Q15768 340 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 DTX2Q86UW9 622 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 OR4A16Q8NH70 328 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 TAF15Q92804 592 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 CORO2AQ92828 525 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 R3HDM4Q96D70 268 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 RAB39BQ96DA2 213 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 SCRT1Q9BWW7 348 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 CALYQ9NYX4 217 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 CUBNO60494 3623 aa10.62□□□□□ -0.71
SMARCB1-203ENST00000407082 KBTBD11-OT1A0A1B0GTJ5 212 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 MARCH11A6NNE9 402 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 C17orf98A8MV24 154 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 B4DEV8 164 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 C3orf80F5H4A9 247 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 H3BP45 60 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 SIGLEC5O15389 551 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 MPDU1O75352 247 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 MT-ND4LP03901 98 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 NQO2P16083 231 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 EGR1P18146 543 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 SSTR5P35346 364 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 FHITP49789 147 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 RAB5BP61020 215 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 C11orf71Q6IPW1 123 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 TMEM88Q6PEY1 159 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 SPSB3Q6PJ21 355 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 OR4S2Q8NH73 311 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 RFESDQ8TAC1 157 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 ZNF251Q9BRH9 671 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 AGMATQ9BSE5 352 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 GGACTQ9BVM4 153 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 BIN3Q9NQY0 253 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 CLN8Q9UBY8 286 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 METRNQ9UJH8 293 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 PRELID1Q9Y255 219 aa10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 ANK3Q12955 4377 aaKnown RBP10.61□□□□□ -0.71
SMARCB1-203ENST00000407082 IGHV3-43A0A0B4J1X8 118 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 TRAV38-1A0A0B4J264 116 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 hADV38S2A0JD32 116 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 C7orf77A4D0Y5 90 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 M0R1X1 148 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 ST8SIA5O15466 376 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 IGHV1-46P01743 117 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 SNRNP70P08621 437 aaKnown RBP10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 IGHV3-43DP0DP04 118 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 RAB11AP62491 216 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 MEF2CQ06413 473 aaPredicted RBP10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 HFEQ30201 348 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 AARDQ4LEZ3 155 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 AWAT1Q58HT5 328 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 PRAMEF5Q5TYX0 476 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 TEX36Q5VZQ5 186 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 CBLN2Q8IUK8 224 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 OR4C12Q96R67 309 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 GCM1Q9NP62 436 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 KCNIP2Q9NS61 270 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 SLC39A9Q9NUM3 307 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 GFOD1Q9NXC2 390 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 IDI2-AS1Q9NZ38 188 aa10.6□□□□□ -0.71
SMARCB1-203ENST00000407082 A0A087WWC5 75 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 C1orf196B1AJZ1 125 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 C9JQL5 133 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 GPR37O15354 613 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 RAMP3O60896 148 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 FCGR3BO75015 233 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 NDUFS7O75251 213 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 HRASP01112 189 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 IFNA17P01571 189 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 IGHV4-39P01824 125 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 SRP19P09132 144 aaKnown RBP10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 OR13C7P0DN81 318 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 CGB3P0DN86 165 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 CGB7P0DN87 165 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 ATP5IP56385 69 aaPredicted RBP10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 RUNX1Q01196 453 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 PNRC1Q12796 327 aaPredicted RBP10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 IZUMO4Q1ZYL8 232 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 PDLIM3Q53GG5 364 aaPredicted RBP10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 STUMQ69YW2 141 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms