RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 RPL23AP62750 156 aaKnown RBP17■□□□□ 0.31
TPM1-208ENST00000404484 AARDQ4LEZ3 155 aa17■□□□□ 0.31
TPM1-208ENST00000404484 SSX9Q7RTT3 188 aa17■□□□□ 0.31
TPM1-208ENST00000404484 OR2C3Q8N628 320 aa17■□□□□ 0.31
TPM1-208ENST00000404484 OR8H1Q8NGG4 311 aa17■□□□□ 0.31
TPM1-208ENST00000404484 MMP26Q9NRE1 261 aa17■□□□□ 0.31
TPM1-208ENST00000404484 FAM157AC9JC47 383 aa16.99■□□□□ 0.31
TPM1-208ENST00000404484 NXPH3O95157 252 aa16.99■□□□□ 0.31
TPM1-208ENST00000404484 TAS2R30P59541 319 aa16.99■□□□□ 0.31
TPM1-208ENST00000404484 UBA52P62987 128 aaKnown RBP16.99■□□□□ 0.31
TPM1-208ENST00000404484 DIAPH2-AS1Q14236 149 aa16.99■□□□□ 0.31
TPM1-208ENST00000404484 TPTE2P1Q5T6R2 138 aa16.99■□□□□ 0.31
TPM1-208ENST00000404484 HARBI1Q96MB7 349 aa16.99■□□□□ 0.31
TPM1-208ENST00000404484 LYRM2Q9NU23 88 aaPredicted RBP16.99■□□□□ 0.31
TPM1-208ENST00000404484 PAIP2BQ9ULR5 123 aaKnown RBP16.99■□□□□ 0.31
TPM1-208ENST00000404484 WSB1Q9Y6I7 421 aa16.99■□□□□ 0.31
TPM1-208ENST00000404484 ARHGAP32A7KAX9 2087 aa16.99■□□□□ 0.31
TPM1-208ENST00000404484 LY6LH3BQJ8 138 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 KCNAB3O43448 404 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 IFNA7P01567 189 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 IGKV1-16P04430 117 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 HOXB4P17483 251 aaPredicted RBP16.98■□□□□ 0.31
TPM1-208ENST00000404484 UBE2KP61086 200 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 MINOS1Q5TGZ0 78 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 OR4A47Q6IF82 309 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 HCP5Q6MZN7 132 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 TEX261Q6UWH6 196 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 OR8H3Q8N146 312 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 CIB3Q96Q77 187 aaPredicted RBP16.98■□□□□ 0.31
TPM1-208ENST00000404484 MINOS1-NBL1R4GNA1 71 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 U3KQ87 197 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 IGHV1-3A0A0C4DH29 117 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 OOSP1A8MZH6 123 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 OR9G9P0C7N8 305 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 CAV2P51636 162 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 PRB3Q04118 309 aaPredicted RBP16.98■□□□□ 0.31
TPM1-208ENST00000404484 KLRD1Q13241 179 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 TMEM249Q2WGJ8 235 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 ZNF429Q86V71 674 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 VKORC1L1Q8N0U8 176 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 OR52E5Q8NH55 327 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 VSTM2AQ8TAG5 236 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 SMIM8Q96KF7 97 aa16.98■□□□□ 0.31
TPM1-208ENST00000404484 ZNF471Q9BX82 626 aaPredicted RBP16.98■□□□□ 0.31
TPM1-208ENST00000404484 LGALS4P56470 323 aa16.97■□□□□ 0.31
TPM1-208ENST00000404484 EIF5AP63241 154 aaKnown RBP16.97■□□□□ 0.31
TPM1-208ENST00000404484 BAXQ07812 192 aa16.97■□□□□ 0.31
TPM1-208ENST00000404484 CCDC144NLQ6NUI1 221 aa16.97■□□□□ 0.31
TPM1-208ENST00000404484 MOB3BQ86TA1 216 aa16.97■□□□□ 0.31
TPM1-208ENST00000404484 MS4A7Q9GZW8 240 aaPredicted RBP16.97■□□□□ 0.31
TPM1-208ENST00000404484 BET1LQ9NYM9 111 aa16.97■□□□□ 0.31
TPM1-208ENST00000404484 PRNDQ9UKY0 176 aa16.97■□□□□ 0.31
TPM1-208ENST00000404484 NAV3Q8IVL0 2385 aa16.96■□□□□ 0.31
TPM1-208ENST00000404484 C15orf61A6NNL5 157 aa16.96■□□□□ 0.31
TPM1-208ENST00000404484 RNASEK-C17orf49H0YIS7 233 aa16.96■□□□□ 0.31
TPM1-208ENST00000404484 LGALS7P47929 136 aa16.96■□□□□ 0.31
TPM1-208ENST00000404484 UBE2E1P51965 193 aa16.96■□□□□ 0.31
TPM1-208ENST00000404484 SPCS3P61009 180 aa16.96■□□□□ 0.31
TPM1-208ENST00000404484 RELBQ01201 579 aa16.96■□□□□ 0.31
TPM1-208ENST00000404484 OR4A5Q8NH83 315 aa16.96■□□□□ 0.31
TPM1-208ENST00000404484 CLCC1Q96S66 551 aa16.96■□□□□ 0.31
TPM1-208ENST00000404484 RBKSQ9H477 322 aa16.96■□□□□ 0.31
TPM1-208ENST00000404484 LPAR2Q9HBW0 351 aa16.96■□□□□ 0.31
TPM1-208ENST00000404484 FOXA2Q9Y261 457 aaPredicted RBP16.96■□□□□ 0.31
TPM1-208ENST00000404484 TBL2Q9Y4P3 447 aaKnown RBP16.96■□□□□ 0.31
TPM1-208ENST00000404484 ANK3Q12955 4377 aaKnown RBP16.95■□□□□ 0.3
TPM1-208ENST00000404484 IFNA17P01571 189 aa16.95■□□□□ 0.3
TPM1-208ENST00000404484 OR2B8PP59922 312 aa16.95■□□□□ 0.3
TPM1-208ENST00000404484 RPS16P62249 146 aaKnown RBP16.95■□□□□ 0.3
TPM1-208ENST00000404484 EWSR1Q01844 656 aaKnown RBP eCLIP16.95■□□□□ 0.3
TPM1-208ENST00000404484 PAX8Q06710 450 aa16.95■□□□□ 0.3
TPM1-208ENST00000404484 PDLIM3Q53GG5 364 aaPredicted RBP16.95■□□□□ 0.3
TPM1-208ENST00000404484 STX12Q86Y82 276 aa16.95■□□□□ 0.3
TPM1-208ENST00000404484 ZNF680Q8NEM1 530 aa16.95■□□□□ 0.3
TPM1-208ENST00000404484 TBX15Q96SF7 602 aa16.95■□□□□ 0.3
TPM1-208ENST00000404484 QTRT1Q9BXR0 403 aaKnown RBP16.95■□□□□ 0.3
TPM1-208ENST00000404484 FKBP11Q9NYL4 201 aa16.95■□□□□ 0.3
TPM1-208ENST00000404484 PSENENQ9NZ42 101 aa16.95■□□□□ 0.3
TPM1-208ENST00000404484 NUP50Q9UKX7 468 aa16.95■□□□□ 0.3
TPM1-208ENST00000404484 SVEP1Q4LDE5 3571 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 CEBPZOSA8MTT3 80 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 B4DSR2 109 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 CD5LO43866 347 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 MSMBP08118 114 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 PAX9P55771 341 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 VMA21Q3ZAQ7 101 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 PUSL1Q8N0Z8 303 aaKnown RBP16.94■□□□□ 0.3
TPM1-208ENST00000404484 TMEM252Q8N6L7 170 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 DTD1Q8TEA8 209 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 A0A1W2PPI3 338 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 FAM24AA6NFZ4 105 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 UPK2O00526 184 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 TMEM50AO95807 157 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 IL6RP08887 468 aaPredicted RBP16.94■□□□□ 0.3
TPM1-208ENST00000404484 SAA1P0DJI8 122 aaPredicted RBP16.94■□□□□ 0.3
TPM1-208ENST00000404484 IAPPP10997 89 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 STOML3Q8TAV4 291 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 ST8SIA2Q92186 375 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 C1orf159Q96HA4 380 aa16.94■□□□□ 0.3
TPM1-208ENST00000404484 RNF5Q99942 180 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms