RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 OR4C13Q8NGP0 309 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 TMEM186Q96B77 213 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 VAX2Q9UIW0 290 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 TIMM8BQ9Y5J9 83 aaPredicted RBP11.69□□□□□ -0.54
SCAF4-202ENST00000399804 CHD8Q9HCK8 2581 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 A0A1W2PPQ1 181 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 ACAA1P09110 424 aaPredicted RBP11.69□□□□□ -0.54
SCAF4-202ENST00000399804 SPP1P10451 314 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 MEF2CQ06413 473 aaPredicted RBP11.69□□□□□ -0.54
SCAF4-202ENST00000399804 HCP5Q6MZN7 132 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 PCSK4Q6UW60 755 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 OR4D5Q8NGN0 318 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 RPRMQ9NS64 109 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 MED12LQ86YW9 2145 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 IGLV1-44P01699 117 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 RPL27AP46776 148 aaKnown RBP11.69□□□□□ -0.54
SCAF4-202ENST00000399804 NDUFA6P56556 154 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 SLC16A13Q7RTY0 426 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 PNKDQ8N490 385 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 NEUROG1Q92886 237 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 FAM122AQ96E09 287 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 BSCL2Q96G97 398 aaPredicted RBP11.69□□□□□ -0.54
SCAF4-202ENST00000399804 ATG2AQ2TAZ0 1938 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 LIPFP07098 398 aa11.68□□□□□ -0.54
SCAF4-202ENST00000399804 SNRPEP62304 92 aaKnown RBP11.68□□□□□ -0.54
SCAF4-202ENST00000399804 DHRS7BQ6IAN0 325 aaPredicted RBP11.68□□□□□ -0.54
SCAF4-202ENST00000399804 UNQ6494/PRO21346Q6UXR6 183 aa11.68□□□□□ -0.54
SCAF4-202ENST00000399804 FGF23Q9GZV9 251 aaPredicted RBP11.68□□□□□ -0.54
SCAF4-202ENST00000399804 YLPM1P49750 1951 aaKnown RBP11.68□□□□□ -0.54
SCAF4-202ENST00000399804 S100A7P31151 101 aa11.68□□□□□ -0.54
SCAF4-202ENST00000399804 BRS3P32247 399 aa11.68□□□□□ -0.54
SCAF4-202ENST00000399804 NPBWR1P48145 328 aa11.68□□□□□ -0.54
SCAF4-202ENST00000399804 RPL30P62888 115 aaKnown RBP11.68□□□□□ -0.54
SCAF4-202ENST00000399804 SRSF3P84103 164 aaKnown RBP11.68□□□□□ -0.54
SCAF4-202ENST00000399804 GINS3Q9BRX5 216 aa11.68□□□□□ -0.54
SCAF4-202ENST00000399804 ZNF835Q9Y2P0 537 aa11.68□□□□□ -0.54
SCAF4-202ENST00000399804 SAA2-SAA4A0A096LPE2 208 aa11.68□□□□□ -0.54
SCAF4-202ENST00000399804 C11orf94C9JXX5 98 aa11.68□□□□□ -0.54
SCAF4-202ENST00000399804 CRYBA1P05813 215 aa11.68□□□□□ -0.54
SCAF4-202ENST00000399804 SAA2P0DJI9 122 aaPredicted RBP11.68□□□□□ -0.54
SCAF4-202ENST00000399804 HTR1DP28221 377 aa11.68□□□□□ -0.54
SCAF4-202ENST00000399804 CLEC7AQ9BXN2 247 aa11.68□□□□□ -0.54
SCAF4-202ENST00000399804 PXMP4Q9Y6I8 212 aa11.68□□□□□ -0.54
SCAF4-202ENST00000399804 LOC105371242A0A075B767 164 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 DUTP33316 252 aaKnown RBP11.67□□□□□ -0.54
SCAF4-202ENST00000399804 LINC00205P59089 165 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 MIC13Q5XKP0 118 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 CYB561D1Q8N8Q1 229 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 IFT22Q9H7X7 185 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 NIT2Q9NQR4 276 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 OR10J4P0C629 311 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 PSG5Q15238 335 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 Q56UQ5 140 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 OR4A47Q6IF82 309 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 OR10J1P30954 320 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 CA7P43166 264 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 ERVK11-1P61568 191 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 SSX2Q16385 188 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 C4orf17Q53FE4 359 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 KHDC3LQ587J8 217 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 Q6ZSR3 168 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 METTL1Q9UBP6 276 aaKnown RBP11.67□□□□□ -0.54
SCAF4-202ENST00000399804 H3BQ15 152 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 TOX4O94842 621 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 CDKN1AP38936 164 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 KRTAP27-1Q3LI81 207 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 RARRES2Q99969 163 aa11.67□□□□□ -0.54
SCAF4-202ENST00000399804 IGHV3-48P01763 117 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 USF1P22415 310 aaPredicted RBP11.66□□□□□ -0.54
SCAF4-202ENST00000399804 NMSQ5H8A3 153 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 MMD2Q8IY49 270 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 NUP37Q8NFH4 326 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 MRPL20Q9BYC9 149 aaKnown RBP11.66□□□□□ -0.54
SCAF4-202ENST00000399804 WDR61Q9GZS3 305 aaKnown RBP11.66□□□□□ -0.54
SCAF4-202ENST00000399804 MBNL3Q9NUK0 354 aaKnown RBP11.66□□□□□ -0.54
SCAF4-202ENST00000399804 FOXI3A8MTJ6 420 aaPredicted RBP11.66□□□□□ -0.54
SCAF4-202ENST00000399804 CLDN34H7C241 214 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 BCL2P10415 239 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 SRSF4Q08170 494 aaKnown RBP11.66□□□□□ -0.54
SCAF4-202ENST00000399804 CCDC144NLQ6NUI1 221 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 DPPA3Q6W0C5 159 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.66□□□□□ -0.54
SCAF4-202ENST00000399804 OR1B1Q8NGR6 318 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 RAB24Q969Q5 203 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 TMUB1Q9BVT8 246 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 TRAV20A0A0B4J274 112 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 UBE2L3P68036 154 aaKnown RBP11.66□□□□□ -0.54
SCAF4-202ENST00000399804 ZNF90Q03938 601 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 PRR27Q6MZM9 219 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 BLNKQ8WV28 456 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 TECRQ9NZ01 308 aaKnown RBP11.66□□□□□ -0.54
SCAF4-202ENST00000399804 C1RLQ9NZP8 487 aa11.66□□□□□ -0.54
SCAF4-202ENST00000399804 MPDU1O75352 247 aa11.65□□□□□ -0.54
SCAF4-202ENST00000399804 IGKV1-5P01602 117 aa11.65□□□□□ -0.54
SCAF4-202ENST00000399804 SNRPCP09234 159 aaKnown RBP11.65□□□□□ -0.54
SCAF4-202ENST00000399804 LYZP61626 148 aa11.65□□□□□ -0.54
SCAF4-202ENST00000399804 OR4X1Q8NH49 305 aa11.65□□□□□ -0.54
SCAF4-202ENST00000399804 MANBALQ9NQG1 85 aa11.65□□□□□ -0.54
SCAF4-202ENST00000399804 DCAF16Q9NXF7 216 aa11.65□□□□□ -0.54
SCAF4-202ENST00000399804 THYN1Q9P016 225 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms