RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 FOXE3Q13461 319 aa13.89□□□□□ -0.19
CTNS-203ENST00000399306 FXYD3Q14802 87 aa13.89□□□□□ -0.19
CTNS-203ENST00000399306 TEX38Q6PEX7 206 aa13.89□□□□□ -0.19
CTNS-203ENST00000399306 MINDY2Q8NBR6 621 aa13.89□□□□□ -0.19
CTNS-203ENST00000399306 ARPC1AQ92747 370 aa13.89□□□□□ -0.19
CTNS-203ENST00000399306 R3HDM4Q96D70 268 aa13.89□□□□□ -0.19
CTNS-203ENST00000399306 NOL4LQ96MY1 436 aaPredicted RBP13.89□□□□□ -0.19
CTNS-203ENST00000399306 PARP11Q9NR21 331 aa13.89□□□□□ -0.19
CTNS-203ENST00000399306 TET2Q6N021 2002 aaPredicted RBP13.88□□□□□ -0.19
CTNS-203ENST00000399306 TRAV41A0A0B4J266 112 aa13.88□□□□□ -0.19
CTNS-203ENST00000399306 PIGBOS1A0A0B4J2F0 54 aa13.88□□□□□ -0.19
CTNS-203ENST00000399306 C3orf85A0A1B0GTC6 90 aa13.88□□□□□ -0.19
CTNS-203ENST00000399306 CRYM-AS1A6NIL9 109 aa13.88□□□□□ -0.19
CTNS-203ENST00000399306 MARCH11A6NNE9 402 aa13.88□□□□□ -0.19
CTNS-203ENST00000399306 ACTL6BO94805 426 aa13.88□□□□□ -0.19
CTNS-203ENST00000399306 S1PR2O95136 353 aa13.88□□□□□ -0.19
CTNS-203ENST00000399306 SERPINE2P07093 398 aa13.88□□□□□ -0.19
CTNS-203ENST00000399306 EGR2P11161 476 aaPredicted RBP13.88□□□□□ -0.19
CTNS-203ENST00000399306 PI3P19957 117 aa13.88□□□□□ -0.19
CTNS-203ENST00000399306 UCP1P25874 307 aa13.88□□□□□ -0.19
CTNS-203ENST00000399306 SSBP2P81877 361 aaPredicted RBP13.88□□□□□ -0.19
CTNS-203ENST00000399306 RBMS2Q15434 407 aaKnown RBP13.88□□□□□ -0.19
CTNS-203ENST00000399306 OR4A47Q6IF82 309 aa13.88□□□□□ -0.19
CTNS-203ENST00000399306 GALNT14Q96FL9 552 aa13.88□□□□□ -0.19
CTNS-203ENST00000399306 NAA60Q9H7X0 242 aa13.88□□□□□ -0.19
CTNS-203ENST00000399306 ZNF430Q9H8G1 570 aaPredicted RBP13.88□□□□□ -0.19
CTNS-203ENST00000399306 ZFP57Q9NU63 452 aa13.88□□□□□ -0.19
CTNS-203ENST00000399306 ARPC1BO15143 372 aaKnown RBP13.87□□□□□ -0.19
CTNS-203ENST00000399306 CNIH1O95406 144 aa13.87□□□□□ -0.19
CTNS-203ENST00000399306 BRI3O95415 125 aa13.87□□□□□ -0.19
CTNS-203ENST00000399306 SLC6A1P30531 599 aa13.87□□□□□ -0.19
CTNS-203ENST00000399306 DHODHQ02127 395 aa13.87□□□□□ -0.19
CTNS-203ENST00000399306 PJVKQ0ZLH3 352 aa13.87□□□□□ -0.19
CTNS-203ENST00000399306 NDUFA11Q86Y39 141 aa13.87□□□□□ -0.19
CTNS-203ENST00000399306 CLCC1Q96S66 551 aa13.87□□□□□ -0.19
CTNS-203ENST00000399306 TSC22D3Q99576 134 aa13.87□□□□□ -0.19
CTNS-203ENST00000399306 VSIG4Q9Y279 399 aa13.87□□□□□ -0.19
CTNS-203ENST00000399306 KCNIP3Q9Y2W7 256 aa13.87□□□□□ -0.19
CTNS-203ENST00000399306 TEX13DA0A0J9YY54 714 aaPredicted RBP13.86□□□□□ -0.19
CTNS-203ENST00000399306 H3BUA1 57 aa13.86□□□□□ -0.19
CTNS-203ENST00000399306 UPK2O00526 184 aa13.86□□□□□ -0.19
CTNS-203ENST00000399306 IGLV1-40P01703 118 aa13.86□□□□□ -0.19
CTNS-203ENST00000399306 UBE2MP61081 183 aaKnown RBP13.86□□□□□ -0.19
CTNS-203ENST00000399306 RPL8P62917 257 aaKnown RBP13.86□□□□□ -0.19
CTNS-203ENST00000399306 THOC7Q6I9Y2 204 aaKnown RBP13.86□□□□□ -0.19
CTNS-203ENST00000399306 SGPP2Q8IWX5 399 aa13.86□□□□□ -0.19
CTNS-203ENST00000399306 VKORC1L1Q8N0U8 176 aa13.86□□□□□ -0.19
CTNS-203ENST00000399306 DMBX1Q8NFW5 382 aa13.86□□□□□ -0.19
CTNS-203ENST00000399306 OR5M8Q8NGP6 311 aa13.86□□□□□ -0.19
CTNS-203ENST00000399306 SEC22AQ96IW7 307 aa13.86□□□□□ -0.19
CTNS-203ENST00000399306 TP53RKQ96S44 253 aa13.86□□□□□ -0.19
CTNS-203ENST00000399306 SPIN2AQ99865 258 aa13.86□□□□□ -0.19
CTNS-203ENST00000399306 SPIN2BQ9BPZ2 258 aa13.86□□□□□ -0.19
CTNS-203ENST00000399306 SRSF8Q9BRL6 282 aaKnown RBP13.86□□□□□ -0.19
CTNS-203ENST00000399306 TMEM140Q9NV12 185 aa13.86□□□□□ -0.19
CTNS-203ENST00000399306 LINC00527Q9UJ94 153 aa13.86□□□□□ -0.19
CTNS-203ENST00000399306 FOXA2Q9Y261 457 aaPredicted RBP13.86□□□□□ -0.19
CTNS-203ENST00000399306 FBXO7Q9Y3I1 522 aa13.86□□□□□ -0.19
CTNS-203ENST00000399306 TSSC4Q9Y5U2 329 aaPredicted RBP13.86□□□□□ -0.19
CTNS-203ENST00000399306 M0QZ24 198 aa13.85□□□□□ -0.19
CTNS-203ENST00000399306 NDUFB6O95139 128 aa13.85□□□□□ -0.19
CTNS-203ENST00000399306 CD28P10747 220 aa13.85□□□□□ -0.19
CTNS-203ENST00000399306 HLA-GP17693 338 aa13.85□□□□□ -0.19
CTNS-203ENST00000399306 PSMB8P28062 276 aa13.85□□□□□ -0.19
CTNS-203ENST00000399306 SRSF4Q08170 494 aaKnown RBP13.85□□□□□ -0.19
CTNS-203ENST00000399306 TNXAQ16473 311 aa13.85□□□□□ -0.19
CTNS-203ENST00000399306 TCTEX1D4Q5JR98 221 aa13.85□□□□□ -0.19
CTNS-203ENST00000399306 SRSF12Q8WXF0 261 aaKnown RBP13.85□□□□□ -0.19
CTNS-203ENST00000399306 IL22RA2Q969J5 263 aa13.85□□□□□ -0.19
CTNS-203ENST00000399306 TMEM222Q9H0R3 208 aa13.85□□□□□ -0.19
CTNS-203ENST00000399306 FKBP11Q9NYL4 201 aa13.85□□□□□ -0.19
CTNS-203ENST00000399306 TRRAPQ9Y4A5 3859 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 PLA2G10O15496 165 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 CDS2O95674 445 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 KRASP01116 189 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 IGKV1-39P01597 117 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 IGKV1D-39P04432 117 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 C2orf68Q2NKX9 166 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 TMEM128Q5BJH2 165 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 CXorf66Q5JRM2 361 aaPredicted RBP13.84□□□□□ -0.19
CTNS-203ENST00000399306 SSX9Q7RTT3 188 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 ZNF329Q86UD4 541 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 SLC25A42Q86VD7 318 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 GRPEL2Q8TAA5 225 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 MYOZ3Q8TDC0 251 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 ABHD5Q8WTS1 349 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 GLYATL2Q8WU03 294 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 TMEM230Q96A57 120 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 WSB1Q9Y6I7 421 aa13.84□□□□□ -0.19
CTNS-203ENST00000399306 TCRBV4S1A1TA0A5B7 111 aa13.83□□□□□ -0.2
CTNS-203ENST00000399306 G3V318 75 aa13.83□□□□□ -0.2
CTNS-203ENST00000399306 LYRM1O43325 122 aa13.83□□□□□ -0.2
CTNS-203ENST00000399306 UPK1BO75841 260 aa13.83□□□□□ -0.2
CTNS-203ENST00000399306 ANXA3P12429 323 aa13.83□□□□□ -0.2
CTNS-203ENST00000399306 BTCP35070 178 aa13.83□□□□□ -0.2
CTNS-203ENST00000399306 RPL27AP46776 148 aaKnown RBP13.83□□□□□ -0.2
CTNS-203ENST00000399306 GNB1P62873 340 aa13.83□□□□□ -0.2
CTNS-203ENST00000399306 SRPXP78539 464 aa13.83□□□□□ -0.2
CTNS-203ENST00000399306 UNQ5815/PRO19632Q6UWF5 114 aa13.83□□□□□ -0.2
CTNS-203ENST00000399306 FAM219AQ8IW50 185 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms