RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 MALRD1Q5VYJ5 2156 aa12.49□□□□□ -0.41
COL25A1-201ENST00000399126 PROP1O75360 226 aa12.49□□□□□ -0.41
COL25A1-201ENST00000399126 SAP30O75446 220 aa12.49□□□□□ -0.41
COL25A1-201ENST00000399126 COL8A2P25067 703 aa12.49□□□□□ -0.41
COL25A1-201ENST00000399126 BRWD1-AS2P59051 145 aa12.49□□□□□ -0.41
COL25A1-201ENST00000399126 SRSF3P84103 164 aaKnown RBP12.49□□□□□ -0.41
COL25A1-201ENST00000399126 EIF4EBP1Q13541 118 aaPredicted RBP12.49□□□□□ -0.41
COL25A1-201ENST00000399126 MORN2Q502X0 79 aa12.49□□□□□ -0.41
COL25A1-201ENST00000399126 Q6ZRM9 215 aa12.49□□□□□ -0.41
COL25A1-201ENST00000399126 MAGT1Q9H0U3 335 aa12.49□□□□□ -0.41
COL25A1-201ENST00000399126 OR6C3Q9NZP0 311 aa12.49□□□□□ -0.41
COL25A1-201ENST00000399126 CTSZQ9UBR2 303 aa12.49□□□□□ -0.41
COL25A1-201ENST00000399126 SLC25A10Q9UBX3 287 aaPredicted RBP12.49□□□□□ -0.41
COL25A1-201ENST00000399126 RCL1Q9Y2P8 373 aaKnown RBP12.49□□□□□ -0.41
COL25A1-201ENST00000399126 DOPEY1Q5JWR5 2465 aa12.49□□□□□ -0.41
COL25A1-201ENST00000399126 MAP1AP78559 2803 aaPredicted RBP12.48□□□□□ -0.41
COL25A1-201ENST00000399126 LINC00473A8K010 186 aa12.48□□□□□ -0.41
COL25A1-201ENST00000399126 HKR1P10072 659 aa12.48□□□□□ -0.41
COL25A1-201ENST00000399126 VDAC1P21796 283 aa12.48□□□□□ -0.41
COL25A1-201ENST00000399126 KIAA0141Q14154 515 aaPredicted RBP12.48□□□□□ -0.41
COL25A1-201ENST00000399126 C1orf87Q8N0U7 546 aa12.48□□□□□ -0.41
COL25A1-201ENST00000399126 F2RL2O00254 374 aa12.48□□□□□ -0.41
COL25A1-201ENST00000399126 IGKV1-5P01602 117 aa12.48□□□□□ -0.41
COL25A1-201ENST00000399126 PRB1P04280 392 aa12.48□□□□□ -0.41
COL25A1-201ENST00000399126 PET100P0DJ07 73 aa12.48□□□□□ -0.41
COL25A1-201ENST00000399126 C1orf229Q6ZS94 237 aaPredicted RBP12.48□□□□□ -0.41
COL25A1-201ENST00000399126 DPF1Q92782 380 aa12.48□□□□□ -0.41
COL25A1-201ENST00000399126 GSX1Q9H4S2 264 aaPredicted RBP12.48□□□□□ -0.41
COL25A1-201ENST00000399126 TRGV10A0A0A0MS01 117 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 KBTBD11-OT1A0A1B0GTJ5 212 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 NKX6-3A6NJ46 265 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 SOD3P08294 240 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 MC5RP33032 325 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 PRSS57Q6UWY2 283 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 GPR146Q96CH1 333 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 AQP10Q96PS8 301 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 SNHG12Q9BXW3 62 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 FAM234AQ9H0X4 552 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 MMP26Q9NRE1 261 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 ZNRD1Q9P1U0 126 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 CLN8Q9UBY8 286 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 JPT1Q9UK76 154 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 C17orf98A8MV24 154 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 M0R143 59 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 TNFRSF13BO14836 293 aaPredicted RBP12.47□□□□□ -0.41
COL25A1-201ENST00000399126 FGF16O43320 207 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 ZNF816Q0VGE8 651 aaPredicted RBP12.47□□□□□ -0.41
COL25A1-201ENST00000399126 RPL39P5Q59GN2 51 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 PRAMEF5Q5TYX0 476 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 IL34Q6ZMJ4 242 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 VCX2Q9H322 139 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 CYTL1Q9NRR1 136 aa12.47□□□□□ -0.41
COL25A1-201ENST00000399126 LIN7CQ9NUP9 197 aaKnown RBP12.47□□□□□ -0.41
COL25A1-201ENST00000399126 GLMPQ8WWB7 406 aa12.46□□□□□ -0.41
COL25A1-201ENST00000399126 TMEM231Q9H6L2 316 aa12.46□□□□□ -0.41
COL25A1-201ENST00000399126 PLEKHF2Q9H8W4 249 aa12.46□□□□□ -0.41
COL25A1-201ENST00000399126 RPS10P5Q9NQ39 176 aa12.46□□□□□ -0.41
COL25A1-201ENST00000399126 ARHGAP32A7KAX9 2087 aa12.46□□□□□ -0.41
COL25A1-201ENST00000399126 ST8SIA3O43173 380 aa12.46□□□□□ -0.41
COL25A1-201ENST00000399126 BRI3O95415 125 aa12.46□□□□□ -0.41
COL25A1-201ENST00000399126 CCL3L1P16619 93 aa12.46□□□□□ -0.41
COL25A1-201ENST00000399126 RPL12P30050 165 aaKnown RBP12.46□□□□□ -0.41
COL25A1-201ENST00000399126 SMIM3Q9BZL3 60 aa12.46□□□□□ -0.41
COL25A1-201ENST00000399126 IFI27L2Q9H2X8 130 aa12.46□□□□□ -0.41
COL25A1-201ENST00000399126 MED13LQ71F56 2210 aa12.46□□□□□ -0.42
COL25A1-201ENST00000399126 WNT2P09544 360 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 FGF7P21781 194 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 LPAR6P43657 344 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 NDUFA6P56556 154 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 H1FXQ92522 213 aaKnown RBP12.45□□□□□ -0.42
COL25A1-201ENST00000399126 IL22RA2Q969J5 263 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 RNF125Q96EQ8 232 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 BBC3Q96PG8 261 aaPredicted RBP12.45□□□□□ -0.42
COL25A1-201ENST00000399126 SSSCA1O60232 199 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 YPEL1O60688 119 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 NKX2-1P43699 371 aaPredicted RBP12.45□□□□□ -0.42
COL25A1-201ENST00000399126 GPR12P47775 334 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 RPL31P62899 125 aaKnown RBP12.45□□□□□ -0.42
COL25A1-201ENST00000399126 CT45A1Q5HYN5 189 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 CT45A3Q8NHU0 189 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 YPEL2Q96QA6 119 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 CACNG5Q9UF02 275 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 LRRK2Q5S007 2527 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 H0Y8G0 127 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 DVL1O14640 695 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 S1PR2O95136 353 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 TMEM50AO95807 157 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 CLDN1O95832 211 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 PJVKQ0ZLH3 352 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 NCR3LG1Q68D85 454 aa12.45□□□□□ -0.42
COL25A1-201ENST00000399126 DUXBA0A1W2PPF3 345 aa12.44□□□□□ -0.42
COL25A1-201ENST00000399126 CLEC18AA5D8T8 446 aa12.44□□□□□ -0.42
COL25A1-201ENST00000399126 SMIM15Q7Z3B0 74 aa12.44□□□□□ -0.42
COL25A1-201ENST00000399126 HSD17B11Q8NBQ5 300 aa12.44□□□□□ -0.42
COL25A1-201ENST00000399126 CLEC18CQ8NCF0 446 aa12.44□□□□□ -0.42
COL25A1-201ENST00000399126 STRAPQ9Y3F4 350 aaKnown RBP12.44□□□□□ -0.42
COL25A1-201ENST00000399126 CENPEQ02224 2701 aa12.44□□□□□ -0.42
COL25A1-201ENST00000399126 ELOA3CA0A087WX78 387 aaPredicted RBP12.44□□□□□ -0.42
COL25A1-201ENST00000399126 E5RGE8 158 aa12.44□□□□□ -0.42
COL25A1-201ENST00000399126 KRASP01116 189 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms