RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 TMEM167AQ8TBQ9 72 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 GIMAP1Q8WWP7 306 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 SNAPC3Q92966 411 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 GPHA2Q96T91 129 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 AIFM2Q9BRQ8 373 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 RBMXL2O75526 392 aaKnown RBP10.26□□□□□ -0.77
VCX3A-202ENST00000398729 IGLV1-51P01701 117 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 TRBV12-3P01733 135 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 PRH1P02810 166 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 RPL27AP46776 148 aaKnown RBP10.26□□□□□ -0.77
VCX3A-202ENST00000398729 SYNJ2BPP57105 145 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 BRWD1-AS2P59051 145 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 ATP5G2Q06055 141 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 CATR1Q13166 79 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 RPEL1Q2QD12 228 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 SSX9Q7RTT3 188 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 SPAG16Q8N0X2 631 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 PUSL1Q8N0Z8 303 aaKnown RBP10.26□□□□□ -0.77
VCX3A-202ENST00000398729 SAMD12Q8N8I0 201 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 OR9G4Q8NGQ1 327 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 BORCS5Q969J3 196 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 KCTD12Q96CX2 325 aaKnown RBP10.26□□□□□ -0.77
VCX3A-202ENST00000398729 ASCL2Q99929 193 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 AKIP1Q9NQ31 210 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 GAR1Q9NY12 217 aaKnown RBP10.26□□□□□ -0.77
VCX3A-202ENST00000398729 ZNF257Q9Y2Q1 563 aa10.26□□□□□ -0.77
VCX3A-202ENST00000398729 TRBV9A0A0B4J1U6 114 aa10.25□□□□□ -0.77
VCX3A-202ENST00000398729 DPPA5A6NC42 116 aa10.25□□□□□ -0.77
VCX3A-202ENST00000398729 HMX3A6NHT5 357 aa10.25□□□□□ -0.77
VCX3A-202ENST00000398729 SULT1C2O00338 296 aa10.25□□□□□ -0.77
VCX3A-202ENST00000398729 RBFOX2O43251 390 aaKnown RBP eCLIP10.25□□□□□ -0.77
VCX3A-202ENST00000398729 TAS2R20P59543 309 aa10.25□□□□□ -0.77
VCX3A-202ENST00000398729 HERV-K104P61576 105 aa10.25□□□□□ -0.77
VCX3A-202ENST00000398729 ZNF45Q02386 682 aa10.25□□□□□ -0.77
VCX3A-202ENST00000398729 EXOSC2Q13868 293 aaKnown RBP10.25□□□□□ -0.77
VCX3A-202ENST00000398729 FAM209BQ5JX69 171 aa10.25□□□□□ -0.77
VCX3A-202ENST00000398729 CASC10Q5T4H9 136 aa10.25□□□□□ -0.77
VCX3A-202ENST00000398729 TMEM17Q86X19 198 aa10.25□□□□□ -0.77
VCX3A-202ENST00000398729 NECAP1Q8NC96 275 aa10.25□□□□□ -0.77
VCX3A-202ENST00000398729 OR4A5Q8NH83 315 aa10.25□□□□□ -0.77
VCX3A-202ENST00000398729 SLC25A46Q96AG3 418 aa10.25□□□□□ -0.77
VCX3A-202ENST00000398729 FYTTD1Q96QD9 318 aaKnown RBP10.25□□□□□ -0.77
VCX3A-202ENST00000398729 EHFQ9NZC4 300 aa10.25□□□□□ -0.77
VCX3A-202ENST00000398729 TRIM64CA6NLI5 447 aa10.24□□□□□ -0.77
VCX3A-202ENST00000398729 NPIPB5A8MRT5 1133 aa10.24□□□□□ -0.77
VCX3A-202ENST00000398729 TEX22C9J3V5 150 aa10.24□□□□□ -0.77
VCX3A-202ENST00000398729 OR2J3O76001 311 aa10.24□□□□□ -0.77
VCX3A-202ENST00000398729 IL6RP08887 468 aaPredicted RBP10.24□□□□□ -0.77
VCX3A-202ENST00000398729 ZNF735P0CB33 412 aa10.24□□□□□ -0.77
VCX3A-202ENST00000398729 TAS2R46P59540 309 aa10.24□□□□□ -0.77
VCX3A-202ENST00000398729 RPL8P62917 257 aaKnown RBP10.24□□□□□ -0.77
VCX3A-202ENST00000398729 OR4A47Q6IF82 309 aa10.24□□□□□ -0.77
VCX3A-202ENST00000398729 ZNF818PQ6ZRF7 136 aa10.24□□□□□ -0.77
VCX3A-202ENST00000398729 HAPLN4Q86UW8 402 aa10.24□□□□□ -0.77
VCX3A-202ENST00000398729 FUNDC2Q9BWH2 189 aa10.24□□□□□ -0.77
VCX3A-202ENST00000398729 HRASLSQ9HDD0 168 aa10.24□□□□□ -0.77
VCX3A-202ENST00000398729 SLC2A9Q9NRM0 540 aa10.24□□□□□ -0.77
VCX3A-202ENST00000398729 BET1LQ9NYM9 111 aa10.24□□□□□ -0.77
VCX3A-202ENST00000398729 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.23□□□□□ -0.77
VCX3A-202ENST00000398729 SMIM31A0A1B0GVY4 71 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 E7EUB6 86 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 H0Y980 276 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 DHFRP00374 187 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 HPRT1P00492 218 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 PRSS3P35030 304 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 RFX2P48378 723 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 TAS2R31P59538 309 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 NCS1P62166 190 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 C15orf32Q32M92 178 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 AADACL3Q5VUY0 350 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 DHRS11Q6UWP2 260 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 IL34Q6ZMJ4 242 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 OR5H2Q8NGV7 314 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 OR51H1Q8NH63 302 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 CD300LFQ8TDQ1 290 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 SIGLEC8Q9NYZ4 499 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 PEMTQ9UBM1 199 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 ADAM30Q9UKF2 790 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 ANAPC10Q9UM13 185 aa10.23□□□□□ -0.77
VCX3A-202ENST00000398729 BMPR1BO00238 502 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 APOA1P02647 267 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 PMP2P02689 132 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 FRMD6-AS1P0C7T7 363 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 NQO2P16083 231 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 HLA-GP17693 338 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 NAT1P18440 290 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 PSMB6P28072 239 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 GNRHRP30968 328 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 VBP1P61758 197 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 POU2AF1Q16633 256 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 SBSPONQ8IVN8 264 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 DMBX1Q8NFW5 382 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 MOB3AQ96BX8 217 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 CMTM3Q96MX0 182 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 ZNF2Q9BSG1 426 aaPredicted RBP10.22□□□□□ -0.77
VCX3A-202ENST00000398729 PLEKHA2Q9HB19 425 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 COMMD3Q9UBI1 195 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 FBXL7Q9UJT9 491 aa10.22□□□□□ -0.77
VCX3A-202ENST00000398729 A0A1B0GW64 132 aa10.21□□□□□ -0.77
VCX3A-202ENST00000398729 EIF4EP06730 217 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms