RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 C5orf52A6NGY3 159 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 C12orf77C9JDV5 145 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 F6UZH7 168 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 CXCL1P09341 107 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 LINC00205P59089 165 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 TMEM241Q24JQ0 296 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 TMEM41BQ5BJD5 291 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 SPNS3Q6ZMD2 512 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 MOB3BQ86TA1 216 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 TMEM147Q9BVK8 224 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 OR51I2Q9H344 312 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 RNF122Q9H9V4 155 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 IGKV1-39P01597 117 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 IGKV1D-39P04432 117 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 HSPB1P04792 205 aaKnown RBP4.17□□□□□ -1.74
SMAD4-202ENST00000398417 COX5AP20674 150 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 UCP1P25874 307 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 RPL30P62888 115 aaKnown RBP4.17□□□□□ -1.74
SMAD4-202ENST00000398417 NRN1LQ496H8 165 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 MOGAT3Q86VF5 341 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 SAXO1Q8IYX7 474 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 LRTM2Q8N967 370 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 Q8WTZ3 238 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 MIOXQ9UGB7 285 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 TRGC1P0CF51 173 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 KITLGP21583 273 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 MDH2P40926 338 aaKnown RBP4.17□□□□□ -1.74
SMAD4-202ENST00000398417 GPR12P47775 334 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 THBS3P49746 956 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 GFRA1P56159 465 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 RPL24P83731 157 aaKnown RBP4.17□□□□□ -1.74
SMAD4-202ENST00000398417 TFF3Q07654 80 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 BSXQ3C1V8 233 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 C16orf82Q7Z2V1 217 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 OR2Z1Q8NG97 314 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 NAGKQ9UJ70 344 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 HBZP02008 142 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 LRRC75BQ2VPJ9 315 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 Q6ZRM9 215 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 LEAP2Q969E1 77 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 SARAFQ96BY9 339 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 GALMQ96C23 342 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 SH2D2AQ9NP31 389 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 KIF26AQ9ULI4 1882 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-202ENST00000398417 F6UB75 175 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 DBX2Q6ZNG2 339 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 C20orf204Q6ZNR8 217 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 ZNRF2Q8NHG8 242 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 FAM103A1Q9BTL3 118 aaKnown RBP4.17□□□□□ -1.74
SMAD4-202ENST00000398417 QTRT1Q9BXR0 403 aaKnown RBP4.17□□□□□ -1.74
SMAD4-202ENST00000398417 GAR1Q9NY12 217 aaKnown RBP4.17□□□□□ -1.74
SMAD4-202ENST00000398417 NAT8Q9UHE5 227 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 WIPI2Q9Y4P8 454 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 TNFSF10P50591 281 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 RIPPLY2Q5TAB7 128 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 SAMD13Q5VXD3 122 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 SPSB4Q96A44 273 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 GUCD1Q96NT3 240 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 KLF2Q9Y5W3 355 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-202ENST00000398417 TMEM131Q92545 1883 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 IGHV1-2P23083 117 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 UBE2AP49459 152 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 CLDND2Q8NHS1 167 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 RPRMQ9NS64 109 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-202ENST00000398417 CISD1Q9NZ45 108 aaKnown RBP4.16□□□□□ -1.74
SMAD4-202ENST00000398417 V9GYY9 64 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 FAM208BQ5VWN6 2430 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 CDC34P49427 236 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-202ENST00000398417 PAX9P55771 341 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 FAM3BP58499 235 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-202ENST00000398417 RBPJQ06330 500 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 FAM169BQ8N8A8 192 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 TAF15Q92804 592 aaKnown RBP eCLIP4.16□□□□□ -1.74
SMAD4-202ENST00000398417 DDA1Q9BW61 102 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 ODAMA1E959 279 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 C20orf202A1L168 122 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 BCL2P10415 239 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 AGAP20933 346 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 ACOT6Q3I5F7 207 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-202ENST00000398417 PDLIM3Q53GG5 364 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-202ENST00000398417 OR10X1Q8NGY0 326 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 GPR87Q9BY21 358 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 K7EQM0 130 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 M0R296 226 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 TNFRSF6BO95407 300 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 IGKV1-5P01602 117 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 BMI1P35226 326 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 RELQ04864 619 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-202ENST00000398417 IQCJQ1A5X6 159 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 Q6ZSR3 168 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 OR1N2Q8NGR9 330 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 GMPPAQ96IJ6 420 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-202ENST00000398417 WDR61Q9GZS3 305 aaKnown RBP4.16□□□□□ -1.74
SMAD4-202ENST00000398417 OR51M1Q9H341 326 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 VAX2Q9UIW0 290 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 ACP1P24666 158 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 CNTFRP26992 372 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF90Q03938 601 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 UHRF2Q96PU4 802 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms