RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 LHFPL1Q86WI0 220 aa11.13□□□□□ -0.63
HDDC2-202ENST00000398153 SRSF12Q8WXF0 261 aaKnown RBP11.13□□□□□ -0.63
HDDC2-202ENST00000398153 DGCR14Q96DF8 476 aaKnown RBP11.13□□□□□ -0.63
HDDC2-202ENST00000398153 P2RX4Q99571 388 aa11.13□□□□□ -0.63
HDDC2-202ENST00000398153 FAM103A1Q9BTL3 118 aaKnown RBP11.13□□□□□ -0.63
HDDC2-202ENST00000398153 MCRIP2Q9BUT9 160 aaKnown RBP11.13□□□□□ -0.63
HDDC2-202ENST00000398153 GPR61Q9BZJ8 451 aa11.13□□□□□ -0.63
HDDC2-202ENST00000398153 KLK15Q9H2R5 256 aa11.13□□□□□ -0.63
HDDC2-202ENST00000398153 ZNF430Q9H8G1 570 aaPredicted RBP11.13□□□□□ -0.63
HDDC2-202ENST00000398153 MEGF8Q7Z7M0 2845 aa11.13□□□□□ -0.63
HDDC2-202ENST00000398153 A0A0G2JLM5 398 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 M0QYG6 137 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 CCL24O00175 119 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 RAB3DO95716 219 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 RLN1P04808 185 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 DGCR2P98153 550 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 SAMD5Q5TGI4 173 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 STEAP1BQ6NZ63 245 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 ETV3LQ6ZN32 361 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 IDO2Q6ZQW0 420 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 LINC00482Q8N8I6 264 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 OR51H1Q8NH63 302 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 TERB2Q8NHR7 220 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 GPHA2Q96T91 129 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 PHB2Q99623 299 aa11.12□□□□□ -0.63
HDDC2-202ENST00000398153 MSGN1A6NI15 193 aa11.11□□□□□ -0.63
HDDC2-202ENST00000398153 I3L521 148 aa11.11□□□□□ -0.63
HDDC2-202ENST00000398153 IL6RP08887 468 aaPredicted RBP11.11□□□□□ -0.63
HDDC2-202ENST00000398153 RND3P61587 244 aa11.11□□□□□ -0.63
HDDC2-202ENST00000398153 RPL8P62917 257 aaKnown RBP11.11□□□□□ -0.63
HDDC2-202ENST00000398153 RNASE12Q5GAN4 147 aaKnown RBP11.11□□□□□ -0.63
HDDC2-202ENST00000398153 KPRPQ5T749 579 aaPredicted RBP11.11□□□□□ -0.63
HDDC2-202ENST00000398153 OR4A47Q6IF82 309 aa11.11□□□□□ -0.63
HDDC2-202ENST00000398153 LCNL1Q6ZST4 164 aa11.11□□□□□ -0.63
HDDC2-202ENST00000398153 SLC25A42Q86VD7 318 aa11.11□□□□□ -0.63
HDDC2-202ENST00000398153 MRPL41Q8IXM3 137 aaKnown RBP11.11□□□□□ -0.63
HDDC2-202ENST00000398153 VKORC1L1Q8N0U8 176 aa11.11□□□□□ -0.63
HDDC2-202ENST00000398153 ZFAND1Q8TCF1 268 aa11.11□□□□□ -0.63
HDDC2-202ENST00000398153 RAX2Q96IS3 184 aa11.11□□□□□ -0.63
HDDC2-202ENST00000398153 TINAGL1Q9GZM7 467 aaPredicted RBP11.11□□□□□ -0.63
HDDC2-202ENST00000398153 DISC1C4P0D8 188 aa11.1□□□□□ -0.63
HDDC2-202ENST00000398153 B3GALNT1O75752 331 aa11.1□□□□□ -0.63
HDDC2-202ENST00000398153 AKAIN1P0CW23 69 aa11.1□□□□□ -0.63
HDDC2-202ENST00000398153 RPA2P15927 270 aa11.1□□□□□ -0.63
HDDC2-202ENST00000398153 ERVK-16P61578 105 aa11.1□□□□□ -0.63
HDDC2-202ENST00000398153 FHL3Q13643 280 aa11.1□□□□□ -0.63
HDDC2-202ENST00000398153 SURF2Q15527 256 aaPredicted RBP11.1□□□□□ -0.63
HDDC2-202ENST00000398153 C18orf65Q6ZTR6 163 aa11.1□□□□□ -0.63
HDDC2-202ENST00000398153 DEDD2Q8WXF8 326 aa11.1□□□□□ -0.63
HDDC2-202ENST00000398153 USMG5Q96IX5 58 aa11.1□□□□□ -0.63
HDDC2-202ENST00000398153 SLC2A9Q9NRM0 540 aa11.1□□□□□ -0.63
HDDC2-202ENST00000398153 TNCP24821 2201 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 ANKRD20A5PA0PJZ0 165 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 MARCH11A6NNE9 402 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 MPPED1O15442 326 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 TRGV3P03979 118 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 LGALS1P09382 135 aaKnown RBP11.09□□□□□ -0.63
HDDC2-202ENST00000398153 OR8U8P0C7N1 319 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 OR9G9P0C7N8 305 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 HLA-GP17693 338 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 ETV6P41212 452 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 TPPP2P59282 170 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 ZNF616Q08AN1 781 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 ASPHD1Q5U4P2 390 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 THOC7Q6I9Y2 204 aaKnown RBP11.09□□□□□ -0.63
HDDC2-202ENST00000398153 TBC1D26Q86UD7 250 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 TTC9CQ8N5M4 171 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 DMBX1Q8NFW5 382 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 OR5T1Q8NG75 326 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 OR11H1Q8NG94 326 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 PRRT1Q99946 306 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 SRSF8Q9BRL6 282 aaKnown RBP11.09□□□□□ -0.63
HDDC2-202ENST00000398153 HRASLSQ9HDD0 168 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 ZNF355PQ9NSJ1 428 aa11.09□□□□□ -0.63
HDDC2-202ENST00000398153 G3V4G9 280 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 UPK2O00526 184 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 S1PR2O95136 353 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 ZNF735P0CB33 412 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 PGAM2P15259 253 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 LPAR6P43657 344 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 RPL27AP46776 148 aaKnown RBP11.08□□□□□ -0.64
HDDC2-202ENST00000398153 AP3S2P59780 193 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 BEAN1Q3B7T3 259 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 ZNF585BQ52M93 769 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 PHLDA2Q53GA4 152 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 FAM209BQ5JX69 171 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 SPANXN2Q5MJ10 180 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 SSX9Q7RTT3 188 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 REC114Q7Z4M0 266 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 CCDC190Q86UF4 302 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 CCDC71LQ8N9Z2 235 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 ADAD2Q8NCV1 583 aaKnown RBP11.08□□□□□ -0.64
HDDC2-202ENST00000398153 OR4D10Q8NGI6 311 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 OR1N2Q8NGR9 330 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 TSC22D3Q99576 134 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 THAP7Q9BT49 309 aaPredicted RBP11.08□□□□□ -0.64
HDDC2-202ENST00000398153 COMMD5Q9GZQ3 224 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 GNB4Q9HAV0 340 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 TMEM140Q9NV12 185 aa11.08□□□□□ -0.64
HDDC2-202ENST00000398153 SLC2A8Q9NY64 477 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms