RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 SLIRPQ9GZT3 109 aaKnown RBP12.89□□□□□ -0.35
APTR-201ENST00000398043 BET1LQ9NYM9 111 aa12.89□□□□□ -0.35
APTR-201ENST00000398043 CEPT1Q9Y6K0 416 aa12.89□□□□□ -0.35
APTR-201ENST00000398043 IGHV4OR15-8A0A075B7B6 117 aa12.88□□□□□ -0.35
APTR-201ENST00000398043 A0A087WW49 117 aa12.88□□□□□ -0.35
APTR-201ENST00000398043 CGB1A6NKQ9 187 aa12.88□□□□□ -0.35
APTR-201ENST00000398043 TEX22C9J3V5 150 aa12.88□□□□□ -0.35
APTR-201ENST00000398043 CREBL2O60519 120 aaPredicted RBP12.88□□□□□ -0.35
APTR-201ENST00000398043 HPRT1P00492 218 aa12.88□□□□□ -0.35
APTR-201ENST00000398043 IGHV3-11P01762 117 aa12.88□□□□□ -0.35
APTR-201ENST00000398043 APELAP0DMC3 54 aa12.88□□□□□ -0.35
APTR-201ENST00000398043 RAB25P57735 213 aa12.88□□□□□ -0.35
APTR-201ENST00000398043 AADACL3Q5VUY0 350 aa12.88□□□□□ -0.35
APTR-201ENST00000398043 OR4A47Q6IF82 309 aa12.88□□□□□ -0.35
APTR-201ENST00000398043 OR51H1Q8NH63 302 aa12.88□□□□□ -0.35
APTR-201ENST00000398043 RSRP1Q9BUV0 290 aa12.88□□□□□ -0.35
APTR-201ENST00000398043 PLEKHA2Q9HB19 425 aa12.88□□□□□ -0.35
APTR-201ENST00000398043 SCOCQ9UIL1 159 aa12.88□□□□□ -0.35
APTR-201ENST00000398043 OR9G9P0C7N8 305 aa12.87□□□□□ -0.35
APTR-201ENST00000398043 ZNF735P0CB33 412 aa12.87□□□□□ -0.35
APTR-201ENST00000398043 CD40LGP29965 261 aa12.87□□□□□ -0.35
APTR-201ENST00000398043 MAS1LP35410 378 aa12.87□□□□□ -0.35
APTR-201ENST00000398043 UCP3P55916 312 aa12.87□□□□□ -0.35
APTR-201ENST00000398043 TAS2R31P59538 309 aa12.87□□□□□ -0.35
APTR-201ENST00000398043 ZNF585BQ52M93 769 aa12.87□□□□□ -0.35
APTR-201ENST00000398043 SSX9Q7RTT3 188 aa12.87□□□□□ -0.35
APTR-201ENST00000398043 LHFPL1Q86WI0 220 aa12.87□□□□□ -0.35
APTR-201ENST00000398043 TTC9CQ8N5M4 171 aa12.87□□□□□ -0.35
APTR-201ENST00000398043 OR4A5Q8NH83 315 aa12.87□□□□□ -0.35
APTR-201ENST00000398043 CD300LFQ8TDQ1 290 aa12.87□□□□□ -0.35
APTR-201ENST00000398043 DCUN1D4Q92564 292 aa12.87□□□□□ -0.35
APTR-201ENST00000398043 TRBV9A0A0B4J1U6 114 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 LINC01619G3V211 115 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 K7EIL1 84 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 M0QYG6 137 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 GPR31O00270 319 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 RGS5O15539 181 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 ACTL6BO94805 426 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 S1PR2O95136 353 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 CD74P04233 296 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 HSPB1P04792 205 aaKnown RBP12.86□□□□□ -0.35
APTR-201ENST00000398043 RLN1P04808 185 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 F2RP25116 425 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 SLURP1P55000 103 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 DGCR2P98153 550 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 DEFA5Q01523 94 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 ZNF45Q02386 682 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 KLK9Q2XQG4 91 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 RNASE12Q5GAN4 147 aaKnown RBP12.86□□□□□ -0.35
APTR-201ENST00000398043 C15orf40Q8WUR7 153 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 DLX4Q92988 240 aaPredicted RBP12.86□□□□□ -0.35
APTR-201ENST00000398043 PHB2Q99623 299 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 SPIN2AQ99865 258 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 SPIN2BQ9BPZ2 258 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 NXF2Q9GZY0 626 aaKnown RBP12.86□□□□□ -0.35
APTR-201ENST00000398043 ZNF355PQ9NSJ1 428 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 COMMD9Q9P000 198 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 KLK9Q9UKQ9 250 aa12.86□□□□□ -0.35
APTR-201ENST00000398043 TRAV3A0A0B4J244 114 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 WI2-2373I1.2A0A1W2PRP0 233 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 GABARAPH6UMI1 98 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 CD3DP04234 171 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 FGF2P09038 288 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 MYOD1P15172 320 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 NQO2P16083 231 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 TBPP20226 339 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 TSPAN5P62079 268 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 RPL8P62917 257 aaKnown RBP12.85□□□□□ -0.35
APTR-201ENST00000398043 C9orf66Q5T8R8 295 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 ZNF343Q6P1L6 599 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 CADM3Q8N126 398 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 OR4D10Q8NGI6 311 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 FCAMRQ8WWV6 532 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 DGCR14Q96DF8 476 aaKnown RBP12.85□□□□□ -0.35
APTR-201ENST00000398043 SOSTQ9BQB4 213 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 AIFM2Q9BRQ8 373 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 RBM38Q9H0Z9 239 aaKnown RBP12.85□□□□□ -0.35
APTR-201ENST00000398043 SLC2A9Q9NRM0 540 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 COA4Q9NYJ1 87 aa12.85□□□□□ -0.35
APTR-201ENST00000398043 A0A0G2JLM5 398 aa12.84□□□□□ -0.35
APTR-201ENST00000398043 HMX3A6NHT5 357 aa12.84□□□□□ -0.35
APTR-201ENST00000398043 SEC14L6B5MCN3 397 aa12.84□□□□□ -0.35
APTR-201ENST00000398043 UPK2O00526 184 aa12.84□□□□□ -0.35
APTR-201ENST00000398043 CTDSPLO15194 276 aa12.84□□□□□ -0.35
APTR-201ENST00000398043 HLA-GP17693 338 aa12.84□□□□□ -0.35
APTR-201ENST00000398043 RPL27AP46776 148 aaKnown RBP12.84□□□□□ -0.35
APTR-201ENST00000398043 SSBP1Q04837 148 aaKnown RBP12.84□□□□□ -0.35
APTR-201ENST00000398043 LPCAT3Q6P1A2 487 aa12.84□□□□□ -0.35
APTR-201ENST00000398043 CMTM1Q8IZ96 169 aa12.84□□□□□ -0.35
APTR-201ENST00000398043 TMEM229BQ8NBD8 167 aa12.84□□□□□ -0.35
APTR-201ENST00000398043 MRAPQ8TCY5 172 aa12.84□□□□□ -0.35
APTR-201ENST00000398043 SMIM4Q8WVI0 70 aa12.84□□□□□ -0.35
APTR-201ENST00000398043 DPF1Q92782 380 aa12.84□□□□□ -0.35
APTR-201ENST00000398043 USMG5Q96IX5 58 aa12.84□□□□□ -0.35
APTR-201ENST00000398043 FAM212BQ9NTI7 297 aaPredicted RBP12.84□□□□□ -0.35
APTR-201ENST00000398043 C13orf42A0A1B0GVH6 325 aa12.83□□□□□ -0.36
APTR-201ENST00000398043 NPIPB5A8MRT5 1133 aa12.83□□□□□ -0.36
APTR-201ENST00000398043 OVOL1O14753 267 aa12.83□□□□□ -0.36
APTR-201ENST00000398043 PRH1P02810 166 aa12.83□□□□□ -0.36
APTR-201ENST00000398043 CRYGCP07315 174 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms