RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 DEFA4P12838 97 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 G6PCP35575 357 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 MAJINQ3KP22 176 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 VHLLQ6RSH7 139 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 TMEM14EPQ6UXP3 125 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 WDR86Q86TI4 376 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 ZNF808Q8N4W9 903 aaPredicted RBP13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 OR5B3Q8NH48 314 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 LOXL4Q96JB6 756 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 STRADBQ9C0K7 418 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 RNF212BA8MTL3 300 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 C11orf94C9JXX5 98 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 ZNF253O75346 499 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 NEURL1O76050 574 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 C1QTNF9P0C862 333 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 CBLN1P23435 193 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 PMP22Q01453 160 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 MOB1BQ7L9L4 216 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 CST9LQ9H4G1 147 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 CHODLQ9H9P2 273 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 IGHV1-69-2A0A0G2JMI3 117 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 PDE6DO43924 150 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 KITLGP21583 273 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 CEBPDP49716 269 aaPredicted RBP13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 OR10G9Q8NGN4 311 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 OR10G7Q8NGN6 311 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 NUDT11Q96G61 164 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 GMPPAQ96IJ6 420 aaPredicted RBP13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 FAM173AQ9BQD7 235 aa13.36□□□□□ -0.27
CHMP1A-201ENST00000397901 SH2D1BO14796 132 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 TFF3Q07654 80 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 VAMP3Q15836 100 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 SPINK9Q5DT21 86 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 LDLRAD2Q5SZI1 272 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 TMPRSS7Q7RTY8 843 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 PNKDQ8N490 385 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 SCCPDHQ8NBX0 429 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 NRN1Q9NPD7 142 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 B4GALT7Q9UBV7 327 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 TBL2Q9Y4P3 447 aaKnown RBP13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 USF3Q68DE3 2245 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 IGHV2-26A0A0B4J1V2 119 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 C9orf172C9J069 976 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 CDIPTO14735 213 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 RHOGP84095 191 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 RNF24Q9Y225 148 aa13.35□□□□□ -0.27
CHMP1A-201ENST00000397901 GTF3C1Q12789 2109 aa13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 A0A1W2PNU3 283 aaPredicted RBP13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 F2Z2F3 143 aa13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 RPL30P62888 115 aaKnown RBP13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 MDP1Q86V88 176 aa13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 OR1L1Q8NH94 360 aa13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 ZDHHC16Q969W1 377 aa13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 TTTY12Q9BZ98 90 aa13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 OR2D2Q9H210 308 aa13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 GPR179Q6PRD1 2367 aa13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 GNB1P62873 340 aa13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 HOXA4Q00056 320 aaPredicted RBP13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 PLA2G2CQ5R387 149 aa13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 C5orf30Q96GV9 206 aa13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 LRFN3Q9BTN0 628 aa13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 TMEM147Q9BVK8 224 aa13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 RTL8AQ9BWD3 113 aa13.34□□□□□ -0.27
CHMP1A-201ENST00000397901 CACNA1DQ01668 2161 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 ODAMA1E959 279 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 FAM90A26D6RGX4 464 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 ZG16O60844 167 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 S1PR2O95136 353 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 CD59P13987 128 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 ZNF90Q03938 601 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 LINC00696Q6ZRV3 163 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 MRPL27Q9P0M9 148 aaKnown RBP13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 RPH3ALQ9UNE2 315 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 SAA2-SAA4A0A096LPE2 208 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 IGLC7A0M8Q6 106 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 FCN1O00602 326 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 RBFOX2O43251 390 aaKnown RBP eCLIP13.33□□□□□ -0.284e-7■□□□□ 8.3
CHMP1A-201ENST00000397901 S100A7P31151 101 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 PLGLB1Q02325 96 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 ABHD17BQ5VST6 288 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 TMEM251Q8N6I4 163 aa13.33□□□□□ -0.28
CHMP1A-201ENST00000397901 DPRXA6NFQ7 191 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 RBMXL2O75526 392 aaKnown RBP13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 REG1AP05451 166 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 GRPP07492 148 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 CELA3BP08861 270 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 COX5AP20674 150 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 AMTP48728 403 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 PRRX1P54821 245 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 OR1C1Q15619 314 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 HLA-DRB5Q30154 266 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 ALKBH6Q3KRA9 238 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 OR52L2PQ8NGH6 319 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 OR10G8Q8NGN5 311 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 SMIM12Q96EX1 92 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 MBNL3Q9NUK0 354 aaKnown RBP13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 LRRC30A6NM36 301 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 NDUFB4O95168 129 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 EGR1P18146 543 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 ZNF645Q8N7E2 425 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms