RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 IGKV1-33P01594 117 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 IGKV1-39P01597 117 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 IGKV1-16P04430 117 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 IGKV1D-39P04432 117 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 SNRNP70P08621 437 aaKnown RBP6.11□□□□□ -1.43
LINC00887-201ENST00000397644 PF4V1P10720 104 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 TMEM11P17152 192 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 AKR1C2P52895 323 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 SCGB2A2Q13296 93 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 LRRC75BQ2VPJ9 315 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 GGNBP1Q5YKI7 109 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 GSG1LQ6UXU4 331 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 RBMS3Q6XE24 437 aaKnown RBP6.11□□□□□ -1.43
LINC00887-201ENST00000397644 LRTM2Q8N967 370 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 SVIPQ8NHG7 77 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 LHFPL5Q8TAF8 219 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 CFHR4Q92496 578 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 IL22RA2Q969J5 263 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 GPR146Q96CH1 333 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 R3HDM4Q96D70 268 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 SEC22AQ96IW7 307 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 TSNAXQ99598 290 aaKnown RBP6.11□□□□□ -1.43
LINC00887-201ENST00000397644 RANBP3Q9H6Z4 567 aaPredicted RBP6.11□□□□□ -1.43
LINC00887-201ENST00000397644 RAB18Q9NP72 206 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 GSKIPQ9P0R6 139 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 MGAT4CQ9UBM8 478 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 FBXL7Q9UJT9 491 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 TMED3Q9Y3Q3 217 aa6.11□□□□□ -1.43
LINC00887-201ENST00000397644 NIPBLQ6KC79 2804 aaeCLIP6.11□□□□□ -1.43
LINC00887-201ENST00000397644 MDFIC2A0A1B0GVS7 189 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 DUXBA0A1W2PPF3 345 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 BTBD17A6NE02 478 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 GOSR2O14653 212 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 RBMXL2O75526 392 aaKnown RBP6.1□□□□□ -1.43
LINC00887-201ENST00000397644 SNAPC5O75971 98 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 VENTXO95231 258 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 SIX6O95475 246 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 VDAC1P21796 283 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 ADMP35318 185 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 BCAP31P51572 246 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 DYNLT3P51808 116 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 F2RL1P55085 397 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 RRAS2P62070 204 aaPredicted RBP6.1□□□□□ -1.43
LINC00887-201ENST00000397644 EBI3Q14213 229 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 HABP2Q14520 560 aaPredicted RBP6.1□□□□□ -1.43
LINC00887-201ENST00000397644 PLGLAQ15195 96 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 PSG5Q15238 335 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 FCN2Q15485 313 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 LY6EQ16553 131 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 C2orf68Q2NKX9 166 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 VMA21Q3ZAQ7 101 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 Q6YL49 198 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 C9orf139Q6ZV77 190 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 PRIMA1Q86XR5 153 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 VKORC1L1Q8N0U8 176 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 CADM3Q8N126 398 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 SLC35G3Q8N808 338 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 TEX45Q8NA69 505 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 OR4A16Q8NH70 328 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 PIFOQ8TCI5 191 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 LSM10Q969L4 123 aaKnown RBP6.1□□□□□ -1.43
LINC00887-201ENST00000397644 HARBI1Q96MB7 349 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 CLCC1Q96S66 551 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 PDCD10Q9BUL8 212 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 CHIAQ9BZP6 476 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 TNFRSF19Q9NS68 423 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.1□□□□□ -1.43
LINC00887-201ENST00000397644 AP5S1Q9NUS5 200 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 C1RLQ9NZP8 487 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 COMMD9Q9P000 198 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 KIAA1456Q9P272 454 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 CDC42EP3Q9UKI2 254 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 MMP24Q9Y5R2 645 aa6.1□□□□□ -1.43
LINC00887-201ENST00000397644 A0A1B0GU03 582 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 DBX1A6NMT0 343 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 MARCH11A6NNE9 402 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 H3BUX3 64 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 UPK2O00526 184 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 CCSO14618 274 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 SLC25A17O43808 307 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 OR2A4O95047 310 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 IGKV1-5P01602 117 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 SULT1A3P0DMM9 295 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 SULT1A4P0DMN0 295 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 HLA-GP17693 338 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 SRD5A1P18405 259 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 CNTFRP26992 372 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 IER3P46695 156 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 CYCSP99999 105 aaKnown RBP6.09□□□□□ -1.43
LINC00887-201ENST00000397644 MMDQ15546 238 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 AANATQ16613 207 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 IZUMO4Q1ZYL8 232 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 IAH1Q2TAA2 248 aaPredicted RBP6.09□□□□□ -1.43
LINC00887-201ENST00000397644 LCE3BQ5TA77 95 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 THOC7Q6I9Y2 204 aaKnown RBP6.09□□□□□ -1.43
LINC00887-201ENST00000397644 FAM219AQ8IW50 185 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 SIGLECL1Q8N7X8 197 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 NPBQ8NG41 125 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 OR1S1Q8NH92 325 aa6.09□□□□□ -1.43
LINC00887-201ENST00000397644 VSTM2AQ8TAG5 236 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms