RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 LNP1A1A4G5 178 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 F5H697 171 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 PRNTQ86SH4 94 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 P2RX4Q99571 388 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 RASL11BQ9BPW5 248 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 ATG101Q9BSB4 218 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 TMUB1Q9BVT8 246 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 TCF19Q9Y242 345 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 PIEZO2Q9H5I5 2752 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 CEACAM18A8MTB9 384 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 HIST1H1EP10412 219 aaKnown RBP9.14□□□□□ -0.95
CCDC40-204ENST00000397545 UCP1P25874 307 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 ZNF506Q5JVG8 444 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 C5orf24Q7Z6I8 188 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 IMMP2LQ96T52 175 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 C5orf63A6NC05 138 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 PGPA6NDG6 321 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 SLC17A3O00476 420 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 SYNGR3O43761 229 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 SRIP30626 198 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 PPOXP50336 477 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 MMDQ15546 238 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 COX19Q49B96 90 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 ABLIM2Q6H8Q1 611 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 DOLPP1Q86YN1 238 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 ST6GALNAC3Q8NDV1 305 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 TMEM54Q969K7 222 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 SLC25A10Q9UBX3 287 aaPredicted RBP9.14□□□□□ -0.95
CCDC40-204ENST00000397545 B4E171 279 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 M0QZK8 103 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 GGCTO75223 188 aaKnown RBP9.14□□□□□ -0.95
CCDC40-204ENST00000397545 TSPAN7P41732 249 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 GABRA6Q16445 453 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 QTRT1Q9BXR0 403 aaKnown RBP9.14□□□□□ -0.95
CCDC40-204ENST00000397545 CEP295Q9C0D2 2601 aa9.14□□□□□ -0.95
CCDC40-204ENST00000397545 PTPN13Q12923 2485 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 LOC390937A0A1W2PQ73 354 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 EFNA2O43921 213 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 RND2P52198 227 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 NUBP1P53384 320 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 CD81P60033 236 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 COL5A1-AS1Q5SY13 56 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 FAM201AQ5SY85 155 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 PPP1R32Q7Z5V6 425 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 PERPQ96FX8 193 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 LYZL4Q96KX0 146 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 SIGLEC12Q96PQ1 595 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 MAP1LC3CQ9BXW4 147 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 K7N7A8 449 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 GCGP01275 180 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 REG1AP05451 166 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 SMIM17P0DL12 118 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 CD99P14209 185 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 ACP1P24666 158 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 SRP14P37108 136 aaKnown RBP9.13□□□□□ -0.95
CCDC40-204ENST00000397545 RPL39P5Q59GN2 51 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 REG4Q9BYZ8 158 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 PKIBQ9C010 78 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 C17orf98A8MV24 154 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 C12orf77C9JDV5 145 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 ISLRO14498 428 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 CD55P08174 381 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 OR4A8P0C604 315 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 TFF3Q07654 80 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 ZNF600Q6ZNG1 722 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 OR8G5Q8NG78 346 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 EAF1Q96JC9 268 aaPredicted RBP9.13□□□□□ -0.95
CCDC40-204ENST00000397545 CALYQ9NYX4 217 aa9.13□□□□□ -0.95
CCDC40-204ENST00000397545 SLC25A17O43808 307 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 MPDU1O75352 247 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 SCGB1C2P0DMR2 95 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 HSPE1P61604 102 aaKnown RBP9.12□□□□□ -0.95
CCDC40-204ENST00000397545 PAFAH1B2P68402 229 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 RELBQ01201 579 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 Q1RN00 199 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 OR51G1Q8NGK1 321 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 THYN1Q9P016 225 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 IFITM10A6NMD0 228 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 CORTO00230 105 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 FGF16O43320 207 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 SUPT4H1P63272 117 aaKnown RBP9.12□□□□□ -0.95
CCDC40-204ENST00000397545 SPATA45Q537H7 98 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 SLC35E4Q6ICL7 350 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 MMD2Q8IY49 270 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 COA4Q9NYJ1 87 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 F8VVB4 439 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 F8VWA3 439 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 SIAH2O43255 324 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 TFF1P04155 84 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 NFAM1Q8NET5 270 aaPredicted RBP9.12□□□□□ -0.95
CCDC40-204ENST00000397545 LSM10Q969L4 123 aaKnown RBP9.12□□□□□ -0.95
CCDC40-204ENST00000397545 LPAR2Q9HBW0 351 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 WFDC1Q9HC57 220 aa9.12□□□□□ -0.95
CCDC40-204ENST00000397545 HYPMO75409 117 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 ATP5G3P48201 142 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 FOXA3P55318 350 aaPredicted RBP9.11□□□□□ -0.95
CCDC40-204ENST00000397545 OR5P3Q8WZ94 311 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 PPIAL4EA0A075B759 164 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 IGHV3-35A0A0C4DH35 117 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 FAM90A26D6RGX4 464 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms