RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 C18orf65Q6ZTR6 163 aa19.82■□□□□ 0.76
TSPAN4-207ENST00000397411 C8orf86Q6ZUL3 223 aa19.82■□□□□ 0.76
TSPAN4-207ENST00000397411 LHFPL1Q86WI0 220 aa19.82■□□□□ 0.76
TSPAN4-207ENST00000397411 PUSL1Q8N0Z8 303 aaKnown RBP19.82■□□□□ 0.76
TSPAN4-207ENST00000397411 Q8N402 240 aa19.82■□□□□ 0.76
TSPAN4-207ENST00000397411 OR6Q1Q8NGQ2 317 aa19.82■□□□□ 0.76
TSPAN4-207ENST00000397411 TMEM167AQ8TBQ9 72 aa19.82■□□□□ 0.76
TSPAN4-207ENST00000397411 ZNF486Q96H40 463 aaPredicted RBP19.82■□□□□ 0.76
TSPAN4-207ENST00000397411 MS4A10Q96PG2 267 aa19.82■□□□□ 0.76
TSPAN4-207ENST00000397411 ANKRD20A5PA0PJZ0 165 aa19.81■□□□□ 0.76
TSPAN4-207ENST00000397411 S1PR2O95136 353 aa19.81■□□□□ 0.76
TSPAN4-207ENST00000397411 RPA2P15927 270 aa19.81■□□□□ 0.76
TSPAN4-207ENST00000397411 OR4A47Q6IF82 309 aa19.81■□□□□ 0.76
TSPAN4-207ENST00000397411 CCDC190Q86UF4 302 aa19.81■□□□□ 0.76
TSPAN4-207ENST00000397411 OR4C16Q8NGL9 310 aa19.81■□□□□ 0.76
TSPAN4-207ENST00000397411 OR4A5Q8NH83 315 aa19.81■□□□□ 0.76
TSPAN4-207ENST00000397411 SRSF12Q8WXF0 261 aaKnown RBP19.81■□□□□ 0.76
TSPAN4-207ENST00000397411 MCUBQ9NWR8 336 aa19.81■□□□□ 0.76
TSPAN4-207ENST00000397411 COMMD9Q9P000 198 aa19.81■□□□□ 0.76
TSPAN4-207ENST00000397411 COPZ2Q9P299 210 aa19.81■□□□□ 0.76
TSPAN4-207ENST00000397411 TNCP24821 2201 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 APELAP0DMC3 54 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 PI3P19957 117 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 MAS1LP35410 378 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 ECI1P42126 302 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 MRGPRG-AS1Q2M3A8 158 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 C19orf54Q5BKX5 351 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 FOXB2Q5VYV0 432 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 MARCH1Q8TCQ1 289 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 CASTOR1Q8WTX7 329 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 SPIN2AQ99865 258 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 PRRT1Q99946 306 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 SPIN2BQ9BPZ2 258 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 SLC2A9Q9NRM0 540 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 VSIG4Q9Y279 399 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 V9GYH0 126 aa19.8■□□□□ 0.76
TSPAN4-207ENST00000397411 SOX15O60248 233 aa19.79■□□□□ 0.76
TSPAN4-207ENST00000397411 ZNF735P0CB33 412 aa19.79■□□□□ 0.76
TSPAN4-207ENST00000397411 CD33P20138 364 aa19.79■□□□□ 0.76
TSPAN4-207ENST00000397411 FAUP35544 74 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-207ENST00000397411 PIGPP57054 158 aa19.79■□□□□ 0.76
TSPAN4-207ENST00000397411 AP3S2P59780 193 aa19.79■□□□□ 0.76
TSPAN4-207ENST00000397411 RPL8P62917 257 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-207ENST00000397411 SSBP2P81877 361 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-207ENST00000397411 CCDC71LQ8N9Z2 235 aa19.79■□□□□ 0.76
TSPAN4-207ENST00000397411 UBE2E2Q96LR5 201 aa19.79■□□□□ 0.76
TSPAN4-207ENST00000397411 FYTTD1Q96QD9 318 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-207ENST00000397411 BET1LQ9NYM9 111 aa19.79■□□□□ 0.76
TSPAN4-207ENST00000397411 SCP2D1Q9UJQ7 156 aa19.79■□□□□ 0.76
TSPAN4-207ENST00000397411 C14orf166Q9Y224 244 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-207ENST00000397411 KRASP01116 189 aa19.78■□□□□ 0.76
TSPAN4-207ENST00000397411 TRGV3P03979 118 aa19.78■□□□□ 0.76
TSPAN4-207ENST00000397411 SERPINE2P07093 398 aa19.78■□□□□ 0.76
TSPAN4-207ENST00000397411 RPL27AP46776 148 aaKnown RBP19.78■□□□□ 0.76
TSPAN4-207ENST00000397411 INPP1P49441 399 aa19.78■□□□□ 0.76
TSPAN4-207ENST00000397411 TPPP2P59282 170 aa19.78■□□□□ 0.76
TSPAN4-207ENST00000397411 TOMM5Q8N4H5 51 aa19.78■□□□□ 0.76
TSPAN4-207ENST00000397411 ZNF491Q8N8L2 437 aa19.78■□□□□ 0.76
TSPAN4-207ENST00000397411 OR13C8Q8NGS7 320 aa19.78■□□□□ 0.76
TSPAN4-207ENST00000397411 OR5B12Q96R08 314 aa19.78■□□□□ 0.76
TSPAN4-207ENST00000397411 SLA2Q9H6Q3 261 aa19.78■□□□□ 0.76
TSPAN4-207ENST00000397411 TMEM140Q9NV12 185 aa19.78■□□□□ 0.76
TSPAN4-207ENST00000397411 COA4Q9NYJ1 87 aa19.78■□□□□ 0.76
TSPAN4-207ENST00000397411 HLA-GP17693 338 aa19.77■□□□□ 0.76
TSPAN4-207ENST00000397411 MYCNOSP40205 109 aa19.77■□□□□ 0.76
TSPAN4-207ENST00000397411 ETV6P41212 452 aa19.77■□□□□ 0.76
TSPAN4-207ENST00000397411 RND3P61587 244 aa19.77■□□□□ 0.76
TSPAN4-207ENST00000397411 OR51S1Q8NGJ8 323 aa19.77■□□□□ 0.76
TSPAN4-207ENST00000397411 C4orf3Q8WVX3 66 aa19.77■□□□□ 0.76
TSPAN4-207ENST00000397411 CCL24O00175 119 aa19.76■□□□□ 0.75
TSPAN4-207ENST00000397411 UPK2O00526 184 aa19.76■□□□□ 0.75
TSPAN4-207ENST00000397411 CTSDP07339 412 aaPredicted RBP19.76■□□□□ 0.75
TSPAN4-207ENST00000397411 ZNF79Q15937 498 aa19.76■□□□□ 0.75
TSPAN4-207ENST00000397411 POU2AF1Q16633 256 aa19.76■□□□□ 0.75
TSPAN4-207ENST00000397411 ZNF585BQ52M93 769 aa19.76■□□□□ 0.75
TSPAN4-207ENST00000397411 C10orf55Q5SWW7 151 aa19.76■□□□□ 0.75
TSPAN4-207ENST00000397411 FAM212BQ9NTI7 297 aaPredicted RBP19.76■□□□□ 0.75
TSPAN4-207ENST00000397411 TRRAPQ9Y4A5 3859 aa19.75■□□□□ 0.75
TSPAN4-207ENST00000397411 MARCH11A6NNE9 402 aa19.75■□□□□ 0.75
TSPAN4-207ENST00000397411 SNAPC5O75971 98 aa19.75■□□□□ 0.75
TSPAN4-207ENST00000397411 G6PCP35575 357 aa19.75■□□□□ 0.75
TSPAN4-207ENST00000397411 RAB25P57735 213 aa19.75■□□□□ 0.75
TSPAN4-207ENST00000397411 SCGB3A2Q96PL1 93 aa19.75■□□□□ 0.75
TSPAN4-207ENST00000397411 DUX3Q96PT4 197 aa19.75■□□□□ 0.75
TSPAN4-207ENST00000397411 COMMD5Q9GZQ3 224 aa19.75■□□□□ 0.75
TSPAN4-207ENST00000397411 MGAM2Q2M2H8 2515 aa19.75■□□□□ 0.75
TSPAN4-207ENST00000397411 H3BUA1 57 aa19.74■□□□□ 0.75
TSPAN4-207ENST00000397411 OR9G9P0C7N8 305 aa19.74■□□□□ 0.75
TSPAN4-207ENST00000397411 SURF2Q15527 256 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-207ENST00000397411 DEFB136Q30KP8 78 aa19.74■□□□□ 0.75
TSPAN4-207ENST00000397411 ASPHD1Q5U4P2 390 aa19.74■□□□□ 0.75
TSPAN4-207ENST00000397411 ZNF57Q68EA5 555 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-207ENST00000397411 SLC25A42Q86VD7 318 aa19.74■□□□□ 0.75
TSPAN4-207ENST00000397411 MYOZ3Q8TDC0 251 aa19.74■□□□□ 0.75
TSPAN4-207ENST00000397411 DPF1Q92782 380 aa19.74■□□□□ 0.75
TSPAN4-207ENST00000397411 RAX2Q96IS3 184 aa19.74■□□□□ 0.75
TSPAN4-207ENST00000397411 GNB4Q9HAV0 340 aa19.74■□□□□ 0.75
TSPAN4-207ENST00000397411 BATF3Q9NR55 127 aa19.74■□□□□ 0.75
TSPAN4-207ENST00000397411 TRAV3A0A0B4J244 114 aa19.73■□□□□ 0.75
TSPAN4-207ENST00000397411 TEX13DA0A0J9YY54 714 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms