RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 CYB561P49447 251 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 GFRA1P56159 465 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 PRR31Q5SQ13 230 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 Q8N976 141 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 OR4B1Q8NGF8 309 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 OR52L2PQ8NGH6 319 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 GALMQ96C23 342 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 SLC45A2Q9UMX9 530 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 IGKV3D-15A0A087WSY6 115 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 PAFAH1B2P68402 229 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 RPL19P84098 196 aaKnown RBP7.66□□□□□ -1.18
CAPN3-206ENST00000397163 CACNA1EQ15878 2313 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 Q5PR19 223 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 ZBTB34Q8NCN2 500 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 NBEAQ8NFP9 2946 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 SAP25Q8TEE9 199 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 NINJ1Q92982 152 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 RTL8AQ9BWD3 113 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 MBNL3Q9NUK0 354 aaKnown RBP7.66□□□□□ -1.18
CAPN3-206ENST00000397163 FAM186AA6NE01 2351 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 FCN1O00602 326 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 CDIPTO14735 213 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 CD1BP29016 333 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 CTRLP40313 264 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 CEBPDP49716 269 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-206ENST00000397163 YPEL3P61236 119 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-206ENST00000397163 RELBQ01201 579 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 KRTCAP3Q53RY4 240 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 SPINK14Q6IE38 97 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 VASH2Q86V25 355 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 C1orf174Q8IYL3 243 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 SPEM1Q8N4L4 309 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 SCCPDHQ8NBX0 429 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 NUDT11Q96G61 164 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 LRFN3Q9BTN0 628 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 CST9LQ9H4G1 147 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 GSX1Q9H4S2 264 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-206ENST00000397163 NRN1Q9NPD7 142 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 POLDIP2Q9Y2S7 368 aa7.66□□□□□ -1.18
CAPN3-206ENST00000397163 TRBV20OR9-2A0A075B6H5 130 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 IGHV2OR16-5A0A0B4J2B6 119 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 SCO2A0A1W2PP80 73 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 RAB29O14966 203 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 CLDN14O95500 239 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 MT-CO3P00414 261 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 P0C879 139 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 ARL14EPLP0DKL9 152 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 Q0VFX4 171 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 VWC2Q2TAL6 325 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 PDLIM3Q53GG5 364 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-206ENST00000397163 MRGPRDQ8TDS7 321 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 BCL2L2Q92843 193 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-206ENST00000397163 C5orf30Q96GV9 206 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 ZNF586Q9NXT0 402 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 WDR83OSQ9Y284 106 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 USF3Q68DE3 2245 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 CACNA1DQ01668 2161 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 DOCK7Q96N67 2140 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 IGHV2-70DA0A0C4DH43 119 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 SNURFLB1AK76 121 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 C12orf77C9JDV5 145 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 TSPOP30536 169 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 TIMP3P35625 211 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 LINC00205P59089 165 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 OCIAD2Q56VL3 154 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 Q8IYB0 196 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 GCNT2Q8N0V5 402 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 OCC1Q8TAD7 63 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 GNB4Q9HAV0 340 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 BOKQ9UMX3 212 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-206ENST00000397163 CUL9Q8IWT3 2517 aa7.65□□□□□ -1.18
CAPN3-206ENST00000397163 TMEM30CPA0ZSE6 113 aa7.65□□□□□ -1.19
CAPN3-206ENST00000397163 C15orf62A8K5M9 175 aa7.65□□□□□ -1.19
CAPN3-206ENST00000397163 NEURL1O76050 574 aa7.65□□□□□ -1.19
CAPN3-206ENST00000397163 GRPP07492 148 aa7.65□□□□□ -1.19
CAPN3-206ENST00000397163 CELA3AP09093 270 aa7.65□□□□□ -1.19
CAPN3-206ENST00000397163 HLA-DRB5Q30154 266 aa7.65□□□□□ -1.19
CAPN3-206ENST00000397163 ASPHD1Q5U4P2 390 aa7.65□□□□□ -1.19
CAPN3-206ENST00000397163 LYSMD4Q5XG99 296 aa7.65□□□□□ -1.19
CAPN3-206ENST00000397163 WDR86Q86TI4 376 aa7.65□□□□□ -1.19
CAPN3-206ENST00000397163 UHRF2Q96PU4 802 aa7.65□□□□□ -1.19
CAPN3-206ENST00000397163 QTRT1Q9BXR0 403 aaKnown RBP7.65□□□□□ -1.19
CAPN3-206ENST00000397163 CSTL1Q9H114 145 aa7.65□□□□□ -1.19
CAPN3-206ENST00000397163 TOMM40O96008 361 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 TNFSF4P23510 183 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 CXCL12P48061 93 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 PPP1R32Q7Z5V6 425 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 TAAR6Q96RI8 345 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 RNF2Q99496 336 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 BET1LQ9NYM9 111 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 TNRC6AQ8NDV7 1962 aaKnown RBP7.64□□□□□ -1.19
CAPN3-206ENST00000397163 OR2T8A6NH00 312 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 FAM166BA8MTA8 275 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 HAND1O96004 215 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 HBZP02008 142 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 BRWD1-AS2P59051 145 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 MIC13Q5XKP0 118 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 OR4A47Q6IF82 309 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 Q8N7P7 452 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 RAB1CQ92928 201 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms