RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 FGF11Q92914 225 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 IMMP2LQ96T52 175 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 RNF115Q9Y4L5 304 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 FHITP49789 147 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 CELA2AP08217 269 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 OR11H4Q8NGC9 324 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 CITED1Q99966 193 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 FBXL7Q9UJT9 491 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 A0A087WX48 190 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 EDIL3O43854 480 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 CGB3P0DN86 165 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 IFI27P40305 119 aaPredicted RBP10.57□□□□□ -0.72
SMU1-201ENST00000397149 SERF2P84101 59 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 FBLN7Q53RD9 439 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 DNM1P46Q6ZS02 220 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 GCSAMQ8N6F7 178 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 MYO7AQ13402 2215 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 SLC17A3O00476 420 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 MARVELD1Q9BSK0 173 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 CTGFP29279 349 aa10.57□□□□□ -0.72
SMU1-201ENST00000397149 SVILO95425 2214 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 RGPD5Q99666 1765 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 ZNF98A6NK75 572 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 NCR2O95944 276 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 IL11P20809 199 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 SRSF7Q16629 238 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMU1-201ENST00000397149 ANXA2RQ3ZCQ2 193 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 ESPL1Q14674 2120 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 IGKV1D-33P01593 117 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 IGKV1-33P01594 117 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 GALP22466 123 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 FGF9P31371 208 aaPredicted RBP10.56□□□□□ -0.72
SMU1-201ENST00000397149 IGHV1-69-2A0A0G2JMI3 117 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 TEX45Q8NA69 505 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 FBXL15Q9H469 300 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 HEATR1Q9H583 2144 aaKnown RBP10.56□□□□□ -0.72
SMU1-201ENST00000397149 C21orf140B9A014 251 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 NDUFS8O00217 210 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 IGHV3-53P01767 116 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 LIPFP07098 398 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 LIFP15018 202 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 TMEM252Q8N6L7 170 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 ZNF818PQ6ZRF7 136 aa10.56□□□□□ -0.72
SMU1-201ENST00000397149 LRP10Q7Z4F1 713 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 YBX2Q9Y2T7 364 aaKnown RBP10.55□□□□□ -0.72
SMU1-201ENST00000397149 IGKV1D-42A0A075B6H8 117 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 KBTBD11-OT1A0A1B0GTJ5 212 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 PSG4Q00888 419 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 APCDD1LQ8NCL9 501 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 GPR146Q96CH1 333 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 KNDC1Q76NI1 1749 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 ZNF585BQ52M93 769 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 XAF1Q6GPH4 301 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 MZB1Q8WU39 189 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 SCN2AQ99250 2005 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 UCNP55089 124 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 DTX2Q86UW9 622 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 GTF3AQ92664 365 aaKnown RBP10.55□□□□□ -0.72
SMU1-201ENST00000397149 VAX1Q5SQQ9 334 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 C7orf69Q9H7B7 122 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 M0R2P5 195 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 NDUFS5O43920 106 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 FOXH1O75593 365 aa10.55□□□□□ -0.72
SMU1-201ENST00000397149 TCRBV4S1A1TA0A5B7 111 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 VDAC2P45880 294 aaPredicted RBP10.54□□□□□ -0.72
SMU1-201ENST00000397149 CEACAM21Q3KPI0 293 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 C10orf35Q96D05 121 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 ST20Q9HBF5 79 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 GSN-AS1Q9NRJ2 163 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 ZNF257Q9Y2Q1 563 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 PRR19A6NJB7 356 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 IGLV3-27P01718 113 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 NPCDR1Q9BY65 106 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 SEPSECSQ9HD40 501 aaKnown RBP10.54□□□□□ -0.72
SMU1-201ENST00000397149 NAV1Q8NEY1 1877 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 PRB2P02812 416 aaPredicted RBP10.54□□□□□ -0.72
SMU1-201ENST00000397149 RPL35AP18077 110 aaKnown RBP10.54□□□□□ -0.72
SMU1-201ENST00000397149 TNFRSF14Q92956 283 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 ODAMA1E959 279 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 PGLYRP1O75594 196 aaPredicted RBP10.54□□□□□ -0.72
SMU1-201ENST00000397149 PEMTQ9UBM1 199 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 TRAV8-1A0A0A6YYK1 113 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 STPG2Q8N412 459 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 C9orf62Q8N4C0 152 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 GGTLC1Q9BX51 225 aa10.54□□□□□ -0.72
SMU1-201ENST00000397149 GLIPR1P48060 266 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 HSPE1P61604 102 aaKnown RBP10.53□□□□□ -0.72
SMU1-201ENST00000397149 LOXL4Q96JB6 756 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 PGPEP1LA6NFU8 196 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 MARCH11A6NNE9 402 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 H0Y980 276 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 CA11O75493 328 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 TRIP11Q15643 1979 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 GFRA3O60609 400 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 TNFRSF6BO95407 300 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 RAG2P55895 527 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 SCAND1P57086 179 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 STPG1Q5TH74 334 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 PPP1R27Q86WC6 154 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 C8orf46Q8TAG6 207 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms