RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 KRTCAP3Q53RY4 240 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 RPL39P5Q59GN2 51 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 ZBTB34Q8NCN2 500 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 MSL2Q9HCI7 577 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 CD99P14209 185 aa11.52□□□□□ -0.56
NUP98-204ENST00000397004 FOSL1P15407 271 aa11.52□□□□□ -0.56
NUP98-204ENST00000397004 DUTP33316 252 aaKnown RBP11.52□□□□□ -0.56
NUP98-204ENST00000397004 RAB1CQ92928 201 aa11.52□□□□□ -0.56
NUP98-204ENST00000397004 KCNIP2Q9NS61 270 aa11.52□□□□□ -0.56
NUP98-204ENST00000397004 GFRA3O60609 400 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 RAC2P15153 192 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 CCKARP32238 428 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 TBC1D28Q2M2D7 210 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 TMEM249Q2WGJ8 235 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 FAM90A1Q86YD7 464 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 ZNF709Q8N972 641 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 SSMEM1Q8WWF3 244 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 R3HDM4Q96D70 268 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 ADGRG4Q8IZF6 3080 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 PDE6DO43924 150 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 STAG3L2P0CL84 134 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 STAG3L3P0CL85 134 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 PLGLB1Q02325 96 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 ARSJQ5FYB0 599 aaPredicted RBP11.52□□□□□ -0.57
NUP98-204ENST00000397004 MDS2Q8NDY4 140 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 TBX15Q96SF7 602 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 KCNIP1Q9NZI2 227 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 B4GALT7Q9UBV7 327 aa11.52□□□□□ -0.57
NUP98-204ENST00000397004 TNCP24821 2201 aa11.51□□□□□ -0.57
NUP98-204ENST00000397004 MS4A10Q96PG2 267 aa11.51□□□□□ -0.57
NUP98-204ENST00000397004 M0R296 226 aa11.51□□□□□ -0.57
NUP98-204ENST00000397004 ACP1P24666 158 aa11.51□□□□□ -0.57
NUP98-204ENST00000397004 TGFBR3Q03167 851 aa11.51□□□□□ -0.57
NUP98-204ENST00000397004 KCNIP4Q6PIL6 250 aa11.51□□□□□ -0.57
NUP98-204ENST00000397004 FAM122AQ96E09 287 aa11.51□□□□□ -0.57
NUP98-204ENST00000397004 LSM4Q9Y4Z0 139 aaKnown RBP11.51□□□□□ -0.57
NUP98-204ENST00000397004 FCGR3BO75015 233 aa11.51□□□□□ -0.57
NUP98-204ENST00000397004 SERF1AO75920 110 aa11.51□□□□□ -0.57
NUP98-204ENST00000397004 OR5I1Q13606 314 aa11.51□□□□□ -0.57
NUP98-204ENST00000397004 MSMPQ1L6U9 139 aa11.51□□□□□ -0.57
NUP98-204ENST00000397004 OR10G8Q8NGN5 311 aa11.51□□□□□ -0.57
NUP98-204ENST00000397004 OBP2BQ9NPH6 170 aa11.51□□□□□ -0.57
NUP98-204ENST00000397004 HPRT1P00492 218 aa11.5□□□□□ -0.57
NUP98-204ENST00000397004 DUSP3P51452 185 aaPredicted RBP11.5□□□□□ -0.57
NUP98-204ENST00000397004 SELENOTP62341 195 aa11.5□□□□□ -0.57
NUP98-204ENST00000397004 Q8N976 141 aa11.5□□□□□ -0.57
NUP98-204ENST00000397004 ZCCHC14Q8WYQ9 949 aaKnown RBP11.5□□□□□ -0.57
NUP98-204ENST00000397004 CADP27708 2225 aa11.5□□□□□ -0.57
NUP98-204ENST00000397004 IRF2P14316 349 aa11.5□□□□□ -0.57
NUP98-204ENST00000397004 BTF3P20290 206 aaKnown RBP11.5□□□□□ -0.57
NUP98-204ENST00000397004 RPL29P47914 159 aaKnown RBP11.5□□□□□ -0.57
NUP98-204ENST00000397004 RPL31P62899 125 aaKnown RBP11.5□□□□□ -0.57
NUP98-204ENST00000397004 RELBQ01201 579 aa11.5□□□□□ -0.57
NUP98-204ENST00000397004 CATR1Q13166 79 aa11.5□□□□□ -0.57
NUP98-204ENST00000397004 MOB3BQ86TA1 216 aa11.5□□□□□ -0.57
NUP98-204ENST00000397004 LEAP2Q969E1 77 aa11.5□□□□□ -0.57
NUP98-204ENST00000397004 TMEM106BQ9NUM4 274 aa11.5□□□□□ -0.57
NUP98-204ENST00000397004 CIB3Q96Q77 187 aaPredicted RBP11.49□□□□□ -0.57
NUP98-204ENST00000397004 MGAQ8IWI9 3026 aa11.49□□□□□ -0.57
NUP98-204ENST00000397004 BSNQ9UPA5 3926 aa11.49□□□□□ -0.57
NUP98-204ENST00000397004 OPRK1P41145 380 aa11.49□□□□□ -0.57
NUP98-204ENST00000397004 C17orf112F2Z3M2 114 aa11.49□□□□□ -0.57
NUP98-204ENST00000397004 F6UZH7 168 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 CER1O95813 267 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 SP9P0CG40 484 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 TMPRSS3P57727 454 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 LOXL3P58215 753 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 EDDM3AQ14507 147 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 EFNB3Q15768 340 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 GABRA6Q16445 453 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 ST6GALNAC3Q8NDV1 305 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 ARFGEF3Q5TH69 2177 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 IGKV1D-17A0A075B6S4 117 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 A0A1W2PPV4 95 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 MORN2Q502X0 79 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 TEX43Q6ZNM6 134 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 CMTM2Q8TAZ6 248 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 ZNF503Q96F45 646 aa11.48□□□□□ -0.57
NUP98-204ENST00000397004 DSCAMO60469 2012 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 NPSP0C0P6 89 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 WDR31Q8NA23 367 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 PRR7Q8TB68 274 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 TAAR6Q96RI8 345 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 HSD17B10Q99714 261 aaKnown RBP11.47□□□□□ -0.57
NUP98-204ENST00000397004 ZDHHC11Q9H8X9 412 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 V9GYV3 84 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 LGALS4P56470 323 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 NINJ1Q92982 152 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 MRPL18Q9H0U6 180 aaKnown RBP11.47□□□□□ -0.57
NUP98-204ENST00000397004 IFI27L2Q9H2X8 130 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 IGKV1OR2-108A0A075B7D4 117 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 M0R143 59 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 IL6RP08887 468 aaPredicted RBP11.47□□□□□ -0.57
NUP98-204ENST00000397004 OR10J1P30954 320 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 RCHY1Q96PM5 261 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 HSPB9Q9BQS6 159 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 LRFN3Q9BTN0 628 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 FBXL7Q9UJT9 491 aa11.47□□□□□ -0.57
NUP98-204ENST00000397004 CGAP01215 116 aa11.46□□□□□ -0.57
NUP98-204ENST00000397004 ESDP10768 282 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms