RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ZNF205O95201 554 aa13.23□□□□□ -0.29
GNE-202ENST00000396594 NMBP08949 121 aa13.23□□□□□ -0.29
GNE-202ENST00000396594 CENPVQ7Z7K6 275 aaPredicted RBP13.23□□□□□ -0.29
GNE-202ENST00000396594 MIEN1Q9BRT3 115 aa13.23□□□□□ -0.29
GNE-202ENST00000396594 C2orf68Q2NKX9 166 aa13.23□□□□□ -0.29
GNE-202ENST00000396594 MINOS1Q5TGZ0 78 aa13.23□□□□□ -0.29
GNE-202ENST00000396594 MINOS1-NBL1R4GNA1 71 aa13.23□□□□□ -0.29
GNE-202ENST00000396594 BSPH1Q075Z2 132 aa13.23□□□□□ -0.29
GNE-202ENST00000396594 ARPC1AQ92747 370 aa13.23□□□□□ -0.29
GNE-202ENST00000396594 GCHFRP30047 84 aa13.22□□□□□ -0.29
GNE-202ENST00000396594 PRSS12P56730 875 aa13.22□□□□□ -0.29
GNE-202ENST00000396594 MRPL54Q6P161 138 aaKnown RBP13.22□□□□□ -0.29
GNE-202ENST00000396594 CIARTQ8N365 385 aaPredicted RBP13.22□□□□□ -0.29
GNE-202ENST00000396594 ATXN7O15265 892 aaPredicted RBP13.22□□□□□ -0.29
GNE-202ENST00000396594 THY1P04216 161 aa13.22□□□□□ -0.29
GNE-202ENST00000396594 RFPL3SP0C7P2 107 aa13.22□□□□□ -0.29
GNE-202ENST00000396594 FCGR2BP31994 310 aaPredicted RBP13.22□□□□□ -0.29
GNE-202ENST00000396594 ARF6P62330 175 aa13.22□□□□□ -0.29
GNE-202ENST00000396594 A0A1B0GTI1 187 aa13.22□□□□□ -0.29
GNE-202ENST00000396594 CKS2P33552 79 aa13.22□□□□□ -0.29
GNE-202ENST00000396594 GUCA2BQ16661 112 aa13.22□□□□□ -0.29
GNE-202ENST00000396594 PPP1R27Q86WC6 154 aa13.22□□□□□ -0.29
GNE-202ENST00000396594 VPS25Q9BRG1 176 aa13.22□□□□□ -0.29
GNE-202ENST00000396594 GPR61Q9BZJ8 451 aa13.22□□□□□ -0.29
GNE-202ENST00000396594 NEUROG3Q9Y4Z2 214 aa13.22□□□□□ -0.29
GNE-202ENST00000396594 TRAV39A0A0B4J263 110 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 A0A1W2PPE3 182 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 LEPP41159 167 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 VWA1Q6PCB0 445 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 CYB561D1Q8N8Q1 229 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 KIR2DL4Q99706 377 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 MPTX1A8MV57 137 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 CIDEAO60543 219 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 MIC13Q5XKP0 118 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 C12orf54Q6X4T0 127 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 ZNF383Q8NA42 475 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 ALKBH7Q9BT30 221 aaPredicted RBP13.21□□□□□ -0.29
GNE-202ENST00000396594 PRSS22Q9GZN4 317 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 IFITM10A6NMD0 228 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 PF4P02776 101 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 PSMB2P49721 201 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 OR10AG1Q8NH19 301 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 C21orf62Q9NYP8 219 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 PRR13Q9NZ81 148 aa13.21□□□□□ -0.29
GNE-202ENST00000396594 TGFBR3LH3BV60 316 aa13.21□□□□□ -0.3
GNE-202ENST00000396594 ZG16O60844 167 aa13.21□□□□□ -0.3
GNE-202ENST00000396594 NDUFB4O95168 129 aa13.21□□□□□ -0.3
GNE-202ENST00000396594 LYPD3O95274 346 aa13.21□□□□□ -0.3
GNE-202ENST00000396594 SRSF9Q13242 221 aaKnown RBP eCLIP13.21□□□□□ -0.3
GNE-202ENST00000396594 KCNS1Q96KK3 526 aa13.21□□□□□ -0.3
GNE-202ENST00000396594 MOB4Q9Y3A3 225 aa13.21□□□□□ -0.3
GNE-202ENST00000396594 PSG7Q13046 419 aa13.2□□□□□ -0.3
GNE-202ENST00000396594 C19orf67A6NJJ6 358 aa13.2□□□□□ -0.3
GNE-202ENST00000396594 THBDP07204 575 aa13.2□□□□□ -0.3
GNE-202ENST00000396594 RCC1P18754 421 aaPredicted RBP13.2□□□□□ -0.3
GNE-202ENST00000396594 LEMD1Q68G75 181 aa13.2□□□□□ -0.3
GNE-202ENST00000396594 LRTM2Q8N967 370 aa13.2□□□□□ -0.3
GNE-202ENST00000396594 AUP1Q9Y679 476 aa13.2□□□□□ -0.3
GNE-202ENST00000396594 A0A1W2PP11 408 aa13.2□□□□□ -0.3
GNE-202ENST00000396594 JOSD1Q15040 202 aaPredicted RBP13.2□□□□□ -0.3
GNE-202ENST00000396594 FAM159AQ6UWV7 190 aa13.2□□□□□ -0.3
GNE-202ENST00000396594 SRSF8Q9BRL6 282 aaKnown RBP13.2□□□□□ -0.3
GNE-202ENST00000396594 TLNRD1Q9H1K6 362 aa13.2□□□□□ -0.3
GNE-202ENST00000396594 ZNF497Q6ZNH5 498 aa13.2□□□□□ -0.3
GNE-202ENST00000396594 C9orf106Q8NAJ2 232 aa13.2□□□□□ -0.3
GNE-202ENST00000396594 SBF1O95248 1867 aa13.2□□□□□ -0.3
GNE-202ENST00000396594 ZFC3H1O60293 1989 aaKnown RBP13.2□□□□□ -0.3
GNE-202ENST00000396594 NBR2O15453 112 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 TRGV3P03979 118 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 GPX1P07203 203 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 TMEM144Q7Z5S9 345 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 GUCD1Q96NT3 240 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 A0A087WWC5 75 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 TRBV6-6A0A0A6YYG2 114 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 UPK2O00526 184 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 TCL1AP56279 114 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 TPRX1Q8N7U7 411 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 ZNF257Q9Y2Q1 563 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 AICDAQ9GZX7 198 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 TMEM133Q9H2Q1 129 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 OTORQ9NRC9 128 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 MTCL1Q9Y4B5 1905 aaKnown RBP13.19□□□□□ -0.3
GNE-202ENST00000396594 A0A0G2JK05 382 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 GDF9O60383 454 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 WBP1Q96G27 269 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 WFDC6Q9BQY6 131 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 SPINK4O60575 86 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 IL6RP08887 468 aaPredicted RBP13.19□□□□□ -0.3
GNE-202ENST00000396594 NPBWR2P48146 333 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 HCP5Q6MZN7 132 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 RSG1Q9BU20 258 aa13.19□□□□□ -0.3
GNE-202ENST00000396594 ARL14EPLP0DKL9 152 aa13.18□□□□□ -0.3
GNE-202ENST00000396594 ST6GALNAC3Q8NDV1 305 aa13.18□□□□□ -0.3
GNE-202ENST00000396594 IGHG3P01860 377 aa13.18□□□□□ -0.3
GNE-202ENST00000396594 CRYGSP22914 178 aa13.18□□□□□ -0.3
GNE-202ENST00000396594 NPCDR1Q9BY65 106 aa13.18□□□□□ -0.3
GNE-202ENST00000396594 C5orf52A6NGY3 159 aa13.18□□□□□ -0.3
GNE-202ENST00000396594 CA2P00918 260 aa13.18□□□□□ -0.3
GNE-202ENST00000396594 SOD3P08294 240 aa13.18□□□□□ -0.3
GNE-202ENST00000396594 SGK494Q96LW2 274 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms