RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 OR10G9Q8NGN4 311 aa13.24□□□□□ -0.29
SNX6-202ENST00000396526 OR10G7Q8NGN6 311 aa13.24□□□□□ -0.29
SNX6-202ENST00000396526 OR9G1Q8NH87 305 aa13.24□□□□□ -0.29
SNX6-202ENST00000396526 ZCCHC14Q8WYQ9 949 aaKnown RBP13.24□□□□□ -0.29
SNX6-202ENST00000396526 PLEKHA3Q9HB20 300 aa13.24□□□□□ -0.29
SNX6-202ENST00000396526 RALYQ9UKM9 306 aaKnown RBP13.24□□□□□ -0.29
SNX6-202ENST00000396526 PUS1Q9Y606 427 aaKnown RBP eCLIP13.24□□□□□ -0.29
SNX6-202ENST00000396526 CTXND1A0A1B0GTU2 59 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 hCG_1809904A0A1W2PP81 198 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 A0A1W2PPE2 198 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 A0A1W2PR64 198 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 A0A1W2PRV1 198 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 ZFP92A6NM28 416 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 CT45A6P0DMU7 189 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 CT45A5P0DMU8 189 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 CT45A7P0DMV0 189 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 HNF4GQ14541 408 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 C8orf31Q8N9H6 132 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 VSTM2AQ8TAG5 236 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 NPCDR1Q9BY65 106 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 OR51B2Q9Y5P1 312 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 ASPMQ8IZT6 3477 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 VWC2Q2TAL6 325 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 ZNF833PQ6ZTB9 187 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 NEIL1Q96FI4 390 aaPredicted RBP13.23□□□□□ -0.29
SNX6-202ENST00000396526 TIMD4Q96H15 378 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 NIPSNAP3BQ9BS92 247 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 MLXQ9UH92 298 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 ZNF257Q9Y2Q1 563 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 ZFHX4Q86UP3 3567 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 TPRP12270 2363 aaKnown RBP13.23□□□□□ -0.29
SNX6-202ENST00000396526 NBASA2RRP1 2371 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 TNFRSF13BO14836 293 aaPredicted RBP13.23□□□□□ -0.29
SNX6-202ENST00000396526 ARG1P05089 322 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 NPY1RP25929 384 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 VDAC2P45880 294 aaPredicted RBP13.23□□□□□ -0.29
SNX6-202ENST00000396526 DLK1P80370 383 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 ADORA2A-AS1P86434 159 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 AWAT1Q58HT5 328 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 LINC00311Q8N616 119 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 FLYWCH2Q96CP2 140 aaKnown RBP13.23□□□□□ -0.29
SNX6-202ENST00000396526 TMEM14BQ9NUH8 114 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 WDR83OSQ9Y284 106 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 TANC2Q9HCD6 1990 aa13.23□□□□□ -0.29
SNX6-202ENST00000396526 J3QR06 171 aa13.22□□□□□ -0.29
SNX6-202ENST00000396526 KBTBD11O94819 623 aa13.22□□□□□ -0.29
SNX6-202ENST00000396526 BCL2P10415 239 aa13.22□□□□□ -0.29
SNX6-202ENST00000396526 PPOXP50336 477 aa13.22□□□□□ -0.29
SNX6-202ENST00000396526 RAB13P51153 203 aa13.22□□□□□ -0.29
SNX6-202ENST00000396526 SLC24A4Q8NFF2 622 aa13.22□□□□□ -0.29
SNX6-202ENST00000396526 TRAV3A0A0B4J244 114 aa13.22□□□□□ -0.29
SNX6-202ENST00000396526 C7orf77A4D0Y5 90 aa13.22□□□□□ -0.29
SNX6-202ENST00000396526 SRP19P09132 144 aaKnown RBP13.22□□□□□ -0.29
SNX6-202ENST00000396526 HARBI1Q96MB7 349 aa13.22□□□□□ -0.29
SNX6-202ENST00000396526 VSIRQ9H7M9 311 aa13.22□□□□□ -0.29
SNX6-202ENST00000396526 VAX2Q9UIW0 290 aa13.22□□□□□ -0.29
SNX6-202ENST00000396526 ANKHD1Q8IWZ3 2542 aaKnown RBP13.22□□□□□ -0.29
SNX6-202ENST00000396526 LOC102723971A0A1B0GUV8 181 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 UPK2O00526 184 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 FSTL3O95633 263 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 LOXP28300 417 aaPredicted RBP13.21□□□□□ -0.29
SNX6-202ENST00000396526 UTF1Q5T230 341 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 C1orf229Q6ZS94 237 aaPredicted RBP13.21□□□□□ -0.29
SNX6-202ENST00000396526 ABHD12Q8N2K0 398 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 P2RX4Q99571 388 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 COMMD5Q9GZQ3 224 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 NPVFQ9HCQ7 196 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 BET1LQ9NYM9 111 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 A0A1W2PPV4 95 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 C1QTNF9P0C862 333 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 MC5RP33032 325 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 PRRX1P54821 245 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 ICAM4Q14773 271 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 TMEM155Q4W5P6 130 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 TGIF2LXQ8IUE1 241 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 OR4C13Q8NGP0 309 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 OR5B3Q8NH48 314 aa13.21□□□□□ -0.29
SNX6-202ENST00000396526 PSMB3P49720 205 aa13.21□□□□□ -0.3
SNX6-202ENST00000396526 UNQ6494/PRO21346Q6UXR6 183 aa13.21□□□□□ -0.3
SNX6-202ENST00000396526 IQCF2Q8IXL9 164 aa13.21□□□□□ -0.3
SNX6-202ENST00000396526 RAB1CQ92928 201 aa13.21□□□□□ -0.3
SNX6-202ENST00000396526 CTSZQ9UBR2 303 aa13.21□□□□□ -0.3
SNX6-202ENST00000396526 DSCAML1Q8TD84 2053 aa13.21□□□□□ -0.3
SNX6-202ENST00000396526 HCFC1P51610 2035 aa13.2□□□□□ -0.3
SNX6-202ENST00000396526 GRNP28799 593 aaKnown RBP13.2□□□□□ -0.3
SNX6-202ENST00000396526 FGF8P55075 233 aaPredicted RBP13.2□□□□□ -0.3
SNX6-202ENST00000396526 PDPNQ86YL7 162 aa13.2□□□□□ -0.3
SNX6-202ENST00000396526 MRPL20Q9BYC9 149 aaKnown RBP13.2□□□□□ -0.3
SNX6-202ENST00000396526 DMXL2Q8TDJ6 3036 aa13.2□□□□□ -0.3
SNX6-202ENST00000396526 LOC105371267A0A1B0GV96 52 aa13.2□□□□□ -0.3
SNX6-202ENST00000396526 FAM122CQ6P4D5 195 aa13.2□□□□□ -0.3
SNX6-202ENST00000396526 RPP25LQ8N5L8 163 aaKnown RBP13.2□□□□□ -0.3
SNX6-202ENST00000396526 C15orf54Q8N8G6 183 aa13.2□□□□□ -0.3
SNX6-202ENST00000396526 TNFRSF14Q92956 283 aa13.2□□□□□ -0.3
SNX6-202ENST00000396526 TFF3Q07654 80 aa13.2□□□□□ -0.3
SNX6-202ENST00000396526 PMS2P11Q13670 270 aa13.2□□□□□ -0.3
SNX6-202ENST00000396526 OR8B3Q8NGG8 313 aa13.2□□□□□ -0.3
SNX6-202ENST00000396526 OR8B2Q96RD0 313 aa13.2□□□□□ -0.3
SNX6-202ENST00000396526 C20orf24Q9BUV8 137 aa13.2□□□□□ -0.3
SNX6-202ENST00000396526 SPTBN4Q9H254 2564 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms