RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 TMEM235A6NFC5 223 aa12.44□□□□□ -0.42
DDR1-229ENST00000396342 NPIPB5A8MRT5 1133 aa12.44□□□□□ -0.42
DDR1-229ENST00000396342 BMPR1BO00238 502 aa12.44□□□□□ -0.42
DDR1-229ENST00000396342 CD300EQ496F6 205 aaPredicted RBP12.44□□□□□ -0.42
DDR1-229ENST00000396342 MFSD4AQ8N468 514 aa12.44□□□□□ -0.42
DDR1-229ENST00000396342 TMEM167AQ8TBQ9 72 aa12.44□□□□□ -0.42
DDR1-229ENST00000396342 SECTM1Q8WVN6 248 aa12.44□□□□□ -0.42
DDR1-229ENST00000396342 C5orf30Q96GV9 206 aa12.44□□□□□ -0.42
DDR1-229ENST00000396342 COMMD5Q9GZQ3 224 aa12.44□□□□□ -0.42
DDR1-229ENST00000396342 TXNL4BQ9NX01 149 aaKnown RBP12.44□□□□□ -0.42
DDR1-229ENST00000396342 RHBDL2Q9NX52 303 aa12.44□□□□□ -0.42
DDR1-229ENST00000396342 ETV7Q9Y603 341 aa12.44□□□□□ -0.42
DDR1-229ENST00000396342 KMT2CQ8NEZ4 4911 aaKnown RBP12.44□□□□□ -0.42
DDR1-229ENST00000396342 DNAH9Q9NYC9 4486 aa12.43□□□□□ -0.42
DDR1-229ENST00000396342 TRBV7-1A0A0A6YYK4 115 aa12.43□□□□□ -0.42
DDR1-229ENST00000396342 OR11H12B2RN74 326 aa12.43□□□□□ -0.42
DDR1-229ENST00000396342 LGALS9O00182 355 aa12.43□□□□□ -0.42
DDR1-229ENST00000396342 OR2C1O95371 312 aa12.43□□□□□ -0.42
DDR1-229ENST00000396342 FOLR2P14207 255 aa12.43□□□□□ -0.42
DDR1-229ENST00000396342 CBX5P45973 191 aa12.43□□□□□ -0.42
DDR1-229ENST00000396342 SCAND1P57086 179 aa12.43□□□□□ -0.42
DDR1-229ENST00000396342 UBE2UQ5VVX9 321 aa12.43□□□□□ -0.42
DDR1-229ENST00000396342 SSX9Q7RTT3 188 aa12.43□□□□□ -0.42
DDR1-229ENST00000396342 VKORC1L1Q8N0U8 176 aa12.43□□□□□ -0.42
DDR1-229ENST00000396342 BEST4Q8NFU0 473 aa12.43□□□□□ -0.42
DDR1-229ENST00000396342 CD300LFQ8TDQ1 290 aa12.43□□□□□ -0.42
DDR1-229ENST00000396342 YTHDF1Q9BYJ9 559 aaKnown RBP12.43□□□□□ -0.42
DDR1-229ENST00000396342 SRD5A3Q9H8P0 318 aa12.43□□□□□ -0.42
DDR1-229ENST00000396342 TRAV18A0A075B6X5 111 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 IGKV1D-8A0A087WSZ0 117 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 A0A0A6YYH2 397 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 HMX3A6NHT5 357 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 A6NJ64 397 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 C2orf70A6NJV1 201 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 HLA-GP17693 338 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 PSMB6P28072 239 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 HERV-K104P61576 105 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 ERVK-16P61578 105 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 MSMO1Q15800 293 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 DEFB114Q30KQ6 69 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 C10orf55Q5SWW7 151 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 ZNF57Q68EA5 555 aaPredicted RBP12.42□□□□□ -0.42
DDR1-229ENST00000396342 SFXN4Q6P4A7 337 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 CLEC19AQ6UXS0 136 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 RBPMS2Q6ZRY4 209 aaKnown RBP12.42□□□□□ -0.42
DDR1-229ENST00000396342 GPHB5Q86YW7 130 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 OR52B4Q8NGK2 314 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 EDA2RQ9HAV5 297 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 ADAM30Q9UKF2 790 aa12.42□□□□□ -0.42
DDR1-229ENST00000396342 PPP5D1E7EU14 171 aa12.41□□□□□ -0.42
DDR1-229ENST00000396342 FCGR2CP31995 323 aa12.41□□□□□ -0.42
DDR1-229ENST00000396342 ZNF45Q02386 682 aa12.41□□□□□ -0.42
DDR1-229ENST00000396342 IDNKQ5T6J7 187 aa12.41□□□□□ -0.42
DDR1-229ENST00000396342 SLC38A6Q8IZM9 456 aa12.41□□□□□ -0.42
DDR1-229ENST00000396342 SPAG16Q8N0X2 631 aa12.41□□□□□ -0.42
DDR1-229ENST00000396342 DMBX1Q8NFW5 382 aa12.41□□□□□ -0.42
DDR1-229ENST00000396342 TSPAN14Q8NG11 270 aa12.41□□□□□ -0.42
DDR1-229ENST00000396342 LGALS14Q8TCE9 139 aa12.41□□□□□ -0.42
DDR1-229ENST00000396342 MARC2Q969Z3 335 aa12.41□□□□□ -0.42
DDR1-229ENST00000396342 SLC5A7Q9GZV3 580 aa12.41□□□□□ -0.42
DDR1-229ENST00000396342 IFT46Q9NQC8 304 aa12.41□□□□□ -0.42
DDR1-229ENST00000396342 ELF5Q9UKW6 265 aaPredicted RBP12.41□□□□□ -0.42
DDR1-229ENST00000396342 LOC100506127A0A0U1RQW1 187 aa12.4□□□□□ -0.42
DDR1-229ENST00000396342 IZUMO1RA6ND01 250 aa12.4□□□□□ -0.42
DDR1-229ENST00000396342 TNFSF12O43508 249 aa12.4□□□□□ -0.42
DDR1-229ENST00000396342 MYOD1P15172 320 aa12.4□□□□□ -0.42
DDR1-229ENST00000396342 NQO2P16083 231 aa12.4□□□□□ -0.42
DDR1-229ENST00000396342 S100GP29377 79 aa12.4□□□□□ -0.42
DDR1-229ENST00000396342 TAS2R31P59538 309 aa12.4□□□□□ -0.42
DDR1-229ENST00000396342 RPL30P62888 115 aaKnown RBP12.4□□□□□ -0.42
DDR1-229ENST00000396342 MXD1Q05195 221 aa12.4□□□□□ -0.42
DDR1-229ENST00000396342 SPARTQ8N0X7 666 aa12.4□□□□□ -0.42
DDR1-229ENST00000396342 OR13F1Q8NGS4 319 aa12.4□□□□□ -0.42
DDR1-229ENST00000396342 BET1LQ9NYM9 111 aa12.4□□□□□ -0.42
DDR1-229ENST00000396342 UFC1Q9Y3C8 167 aa12.4□□□□□ -0.42
DDR1-229ENST00000396342 IGKV1D-13A0A0B4J2D9 117 aa12.39□□□□□ -0.43
DDR1-229ENST00000396342 RBFOX2O43251 390 aaKnown RBP eCLIP12.39□□□□□ -0.43
DDR1-229ENST00000396342 TMEM127O75204 238 aa12.39□□□□□ -0.43
DDR1-229ENST00000396342 HPRT1P00492 218 aa12.39□□□□□ -0.43
DDR1-229ENST00000396342 HLA-AP01891 365 aaKnown RBP12.39□□□□□ -0.43
DDR1-229ENST00000396342 ZNF735P0CB33 412 aa12.39□□□□□ -0.43
DDR1-229ENST00000396342 IGKV1-13P0DP09 117 aa12.39□□□□□ -0.43
DDR1-229ENST00000396342 CBLN1P23435 193 aa12.39□□□□□ -0.43
DDR1-229ENST00000396342 FXYD4P59646 89 aa12.39□□□□□ -0.43
DDR1-229ENST00000396342 MRGPRG-AS1Q2M3A8 158 aa12.39□□□□□ -0.43
DDR1-229ENST00000396342 TIMM50Q3ZCQ8 353 aa12.39□□□□□ -0.43
DDR1-229ENST00000396342 AADACL3Q5VUY0 350 aa12.39□□□□□ -0.43
DDR1-229ENST00000396342 THOC7Q6I9Y2 204 aaKnown RBP12.39□□□□□ -0.43
DDR1-229ENST00000396342 PLET1Q6UQ28 207 aa12.39□□□□□ -0.43
DDR1-229ENST00000396342 HSD17B13Q7Z5P4 300 aaPredicted RBP12.39□□□□□ -0.43
DDR1-229ENST00000396342 CROCCP3Q8IVE0 287 aa12.39□□□□□ -0.43
DDR1-229ENST00000396342 PUSL1Q8N0Z8 303 aaKnown RBP12.39□□□□□ -0.43
DDR1-229ENST00000396342 DEFB125Q8N687 156 aa12.39□□□□□ -0.43
DDR1-229ENST00000396342 SRSF8Q9BRL6 282 aaKnown RBP12.39□□□□□ -0.43
DDR1-229ENST00000396342 TEX22C9J3V5 150 aa12.38□□□□□ -0.43
DDR1-229ENST00000396342 PPYP01298 95 aa12.38□□□□□ -0.43
DDR1-229ENST00000396342 IGHV3-23P01764 117 aa12.38□□□□□ -0.43
DDR1-229ENST00000396342 CRYGCP07315 174 aa12.38□□□□□ -0.43
DDR1-229ENST00000396342 SDC2P34741 201 aa12.38□□□□□ -0.43
DDR1-229ENST00000396342 MECP2P51608 486 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms