RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 LINC00473A8K010 186 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 BET1O15155 118 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 SAA1P0DJI8 122 aaPredicted RBP11.73□□□□□ -0.53
SNCA-205ENST00000394991 RRASP10301 218 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 RAB3BP20337 219 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 ARL3P36405 182 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 RANBP1P43487 201 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 NEDD8Q15843 81 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 ANKRD55Q3KP44 614 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 IGSF11Q5DX21 431 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 CLEC19AQ6UXS0 136 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 OR4A4PQ8NGN8 299 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 RNF183Q96D59 192 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 SPIN2AQ99865 258 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 SPIN2BQ9BPZ2 258 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 CABLES2Q9BTV7 478 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 PECRQ9BY49 303 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 FBXL7Q9UJT9 491 aa11.73□□□□□ -0.53
SNCA-205ENST00000394991 TMEM272A0A1B0GTI8 110 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 ZNF320A2RRD8 509 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 SMIM30A4D0T7 59 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 TEX22C9J3V5 150 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 FABP7O15540 132 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 GALP22466 123 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 DUTP33316 252 aaKnown RBP11.72□□□□□ -0.53
SNCA-205ENST00000394991 SERPINB10P48595 397 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 APOC4P55056 127 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 CDK10Q15131 360 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 KCTD21Q4G0X4 260 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 PLAC9Q5JTB6 97 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 OR1L6Q8NGR2 347 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 FANCD2OSQ96PS1 177 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 TXNL4BQ9NX01 149 aaKnown RBP11.72□□□□□ -0.53
SNCA-205ENST00000394991 UBQLN2Q9UHD9 624 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 SSR3Q9UNL2 185 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 ZNF257Q9Y2Q1 563 aa11.72□□□□□ -0.53
SNCA-205ENST00000394991 TRBV6-7A0A0A0MS04 114 aa11.71□□□□□ -0.53
SNCA-205ENST00000394991 TRAV25A0A0B4J276 109 aa11.71□□□□□ -0.53
SNCA-205ENST00000394991 IFITM5A6NNB3 132 aa11.71□□□□□ -0.53
SNCA-205ENST00000394991 GSTT2P0CG29 244 aa11.71□□□□□ -0.53
SNCA-205ENST00000394991 GSTT2BP0CG30 244 aa11.71□□□□□ -0.53
SNCA-205ENST00000394991 PLA2G7Q13093 441 aa11.71□□□□□ -0.53
SNCA-205ENST00000394991 UNQ9165/PRO28630Q6UXU0 137 aa11.71□□□□□ -0.53
SNCA-205ENST00000394991 SLC25A42Q86VD7 318 aa11.71□□□□□ -0.53
SNCA-205ENST00000394991 MMD2Q8IY49 270 aa11.71□□□□□ -0.53
SNCA-205ENST00000394991 OSR1Q8TAX0 266 aaPredicted RBP11.71□□□□□ -0.53
SNCA-205ENST00000394991 OR51E2Q9H255 320 aa11.71□□□□□ -0.53
SNCA-205ENST00000394991 RAB22AQ9UL26 194 aa11.71□□□□□ -0.53
SNCA-205ENST00000394991 A0A1B0GW64 132 aa11.7□□□□□ -0.54
SNCA-205ENST00000394991 NPIPB5A8MRT5 1133 aa11.7□□□□□ -0.54
SNCA-205ENST00000394991 E7EUB6 86 aa11.7□□□□□ -0.54
SNCA-205ENST00000394991 UBE2CO00762 179 aa11.7□□□□□ -0.54
SNCA-205ENST00000394991 ACTL6BO94805 426 aa11.7□□□□□ -0.54
SNCA-205ENST00000394991 C8orf88P0DMB2 117 aa11.7□□□□□ -0.54
SNCA-205ENST00000394991 FAM106AQ4KMX7 169 aa11.7□□□□□ -0.54
SNCA-205ENST00000394991 OR56B1Q8NGI3 324 aa11.7□□□□□ -0.54
SNCA-205ENST00000394991 ADTRPQ96IZ2 230 aa11.7□□□□□ -0.54
SNCA-205ENST00000394991 FAT2Q9NYQ8 4349 aa11.7□□□□□ -0.54
SNCA-205ENST00000394991 S1PR2O95136 353 aa11.69□□□□□ -0.54
SNCA-205ENST00000394991 IL6RP08887 468 aaPredicted RBP11.69□□□□□ -0.54
SNCA-205ENST00000394991 FGF9P31371 208 aaPredicted RBP11.69□□□□□ -0.54
SNCA-205ENST00000394991 ODF3L2Q3SX64 289 aa11.69□□□□□ -0.54
SNCA-205ENST00000394991 OR4A47Q6IF82 309 aa11.69□□□□□ -0.54
SNCA-205ENST00000394991 NR2C2APQ86WQ0 139 aa11.69□□□□□ -0.54
SNCA-205ENST00000394991 OR2C3Q8N628 320 aa11.69□□□□□ -0.54
SNCA-205ENST00000394991 TMEM217Q8N7C4 229 aa11.69□□□□□ -0.54
SNCA-205ENST00000394991 OR10J5Q8NHC4 309 aa11.69□□□□□ -0.54
SNCA-205ENST00000394991 MAFIPQ8WZ33 124 aa11.69□□□□□ -0.54
SNCA-205ENST00000394991 KCNK7Q9Y2U2 307 aa11.69□□□□□ -0.54
SNCA-205ENST00000394991 PKHD1P08F94 4074 aa11.69□□□□□ -0.54
SNCA-205ENST00000394991 A0A075B6Q4 140 aa11.68□□□□□ -0.54
SNCA-205ENST00000394991 KIR2DL5BA0A0G2JN68 375 aa11.68□□□□□ -0.54
SNCA-205ENST00000394991 KIR2DL5BA0A0G2JPC4 375 aa11.68□□□□□ -0.54
SNCA-205ENST00000394991 LOC100506127A0A0U1RQW1 187 aa11.68□□□□□ -0.54
SNCA-205ENST00000394991 CREBL2O60519 120 aaPredicted RBP11.68□□□□□ -0.54
SNCA-205ENST00000394991 FCGR3AP08637 254 aa11.68□□□□□ -0.54
SNCA-205ENST00000394991 AREGP15514 252 aa11.68□□□□□ -0.54
SNCA-205ENST00000394991 CD36P16671 472 aa11.68□□□□□ -0.54
SNCA-205ENST00000394991 GADD45AP24522 165 aa11.68□□□□□ -0.54
SNCA-205ENST00000394991 FCGR2BP31994 310 aaPredicted RBP11.68□□□□□ -0.54
SNCA-205ENST00000394991 MRPS15P82914 257 aaKnown RBP11.68□□□□□ -0.54
SNCA-205ENST00000394991 ZNF585BQ52M93 769 aa11.68□□□□□ -0.54
SNCA-205ENST00000394991 RBPMS2Q6ZRY4 209 aaKnown RBP11.68□□□□□ -0.54
SNCA-205ENST00000394991 KIR2DL5AQ8N109 375 aa11.68□□□□□ -0.54
SNCA-205ENST00000394991 KIR2DL5BQ8NHK3 375 aa11.68□□□□□ -0.54
SNCA-205ENST00000394991 EEF1AKMT3Q96AZ1 226 aa11.68□□□□□ -0.54
SNCA-205ENST00000394991 RAB3CQ96E17 227 aa11.68□□□□□ -0.54
SNCA-205ENST00000394991 RBM7Q9Y580 266 aaKnown RBP11.68□□□□□ -0.54
SNCA-205ENST00000394991 DNAH2Q9P225 4427 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 MFSD2BA6NFX1 497 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 NOTOA8MTQ0 251 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 FCGR3BO75015 233 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 DIRAS3O95661 229 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 CTRB1P17538 263 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 RPL35AP18077 110 aaKnown RBP11.67□□□□□ -0.54
SNCA-205ENST00000394991 RPL27AP46776 148 aaKnown RBP11.67□□□□□ -0.54
SNCA-205ENST00000394991 NANOS2P60321 138 aaKnown RBP11.67□□□□□ -0.54
SNCA-205ENST00000394991 MXD1Q05195 221 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 KLK9Q2XQG4 91 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 CTRB2Q6GPI1 263 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms