RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 KPTNQ9Y664 436 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 ZNF737O75373 536 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 OR2C1O95371 312 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 HPRT1P00492 218 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 HBE1P02100 147 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 COL8A2P25067 703 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 RPP30P78346 268 aaKnown RBP13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 FAM216AQ8WUB2 273 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 CIB3Q96Q77 187 aaPredicted RBP13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 MRPL20Q9BYC9 149 aaKnown RBP13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 DIAPH2-AS1Q14236 149 aa13.15□□□□□ -0.31
SMARCD1-202ENST00000394963 ZNF561Q8N587 486 aa13.15□□□□□ -0.31
SMARCD1-202ENST00000394963 OR10A7Q8NGE5 316 aa13.15□□□□□ -0.31
SMARCD1-202ENST00000394963 TAF15Q92804 592 aaKnown RBP eCLIP13.15□□□□□ -0.31
SMARCD1-202ENST00000394963 RAB39BQ96DA2 213 aa13.15□□□□□ -0.31
SMARCD1-202ENST00000394963 A1L4Q6 167 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 TRIM77I1YAP6 450 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 CD200P41217 278 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 LRTM2Q8N967 370 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 OR10W1Q8NGF6 305 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 PLA2G2EQ9NZK7 142 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 WNK1Q9H4A3 2382 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 C17orf112F2Z3M2 114 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 RRHO14718 337 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 PAGE4O60829 102 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 NDUFS7O75251 213 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 SPP1P10451 314 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 PSMB3P49720 205 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 MLANAQ16655 118 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 FLYWCH2Q96CP2 140 aaKnown RBP13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 JPT1Q9UK76 154 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 TCF19Q9Y242 345 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 OR51B2Q9Y5P1 312 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 INSIG2Q9Y5U4 225 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 ADCYAP1P18509 176 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 APOBEC3AP31941 199 aaPredicted RBP13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 UQCRFS1P47985 274 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 UCNP55089 124 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 IL15RAQ13261 267 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 ELOVL5Q9NYP7 299 aa13.14□□□□□ -0.31
SMARCD1-202ENST00000394963 ASH1LQ9NR48 2969 aaKnown RBP13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 CYB5BO43169 146 aa13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 THBDP07204 575 aa13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 GNB2P62879 340 aa13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 SRSF4Q08170 494 aaKnown RBP13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 C1orf196B1AJZ1 125 aa13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 NPY1RP25929 384 aa13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 CD1BP29016 333 aa13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 RAB5CP51148 216 aa13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 OR4A47Q6IF82 309 aa13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 TRAT1Q6PIZ9 186 aa13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 GATAD1Q8WUU5 269 aa13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 FRZBQ92765 325 aa13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 VKORC1Q9BQB6 163 aa13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 TMEM147Q9BVK8 224 aa13.13□□□□□ -0.31
SMARCD1-202ENST00000394963 SPINK4O60575 86 aa13.12□□□□□ -0.31
SMARCD1-202ENST00000394963 RHEBQ15382 184 aa13.12□□□□□ -0.31
SMARCD1-202ENST00000394963 C9orf152Q5JTZ5 239 aa13.12□□□□□ -0.31
SMARCD1-202ENST00000394963 Q8NFD4 153 aa13.12□□□□□ -0.31
SMARCD1-202ENST00000394963 SMCO4Q9NRQ5 59 aa13.12□□□□□ -0.31
SMARCD1-202ENST00000394963 SERTAD4Q9NUC0 356 aa13.12□□□□□ -0.31
SMARCD1-202ENST00000394963 OR10J4P0C629 311 aa13.12□□□□□ -0.31
SMARCD1-202ENST00000394963 SSX2Q16385 188 aa13.12□□□□□ -0.31
SMARCD1-202ENST00000394963 UQCC3Q6UW78 93 aa13.12□□□□□ -0.31
SMARCD1-202ENST00000394963 TVP23CQ96ET8 276 aa13.12□□□□□ -0.31
SMARCD1-202ENST00000394963 GAFA1Q96PS6 74 aa13.12□□□□□ -0.31
SMARCD1-202ENST00000394963 ACTR3CQ9C0K3 210 aaPredicted RBP13.12□□□□□ -0.31
SMARCD1-202ENST00000394963 IGHV3-35A0A0C4DH35 117 aa13.12□□□□□ -0.31
SMARCD1-202ENST00000394963 PAX9P55771 341 aa13.12□□□□□ -0.31
SMARCD1-202ENST00000394963 H3BTX0 84 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 MST1LQ2TV78 715 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 FAM78BQ5VT40 261 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 ZNF66Q6ZN08 573 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 ZBTB34Q8NCN2 500 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 RAB1BQ9H0U4 201 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 YIF1AO95070 293 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 CDC34P49427 236 aaPredicted RBP13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 GUSBP1Q15486 140 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 PNKDQ8N490 385 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 KIR3DL3Q8N743 410 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 LSM10Q969L4 123 aaKnown RBP13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 RCC1LQ96I51 464 aaKnown RBP13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 SMIM8Q96KF7 97 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 UNKLQ9H9P5 680 aaKnown RBP13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 TNFRSF19Q9NS68 423 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 ORM2P19652 201 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 GNLYP22749 145 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 ERHP84090 104 aaKnown RBP13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 TMEM200BQ69YZ2 307 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 ZNF525Q8N782 197 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 LFNGQ8NES3 379 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 GINS3Q9BRX5 216 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 FLNCQ14315 2725 aa13.11□□□□□ -0.31
SMARCD1-202ENST00000394963 PPIAL4CA0A0B4J2A2 164 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 DUXBA0A1W2PPF3 345 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 H3BQ15 152 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 PPIAL4GP0DN37 164 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 CHRNA7P36544 502 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 ZNF343Q6P1L6 599 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 ZNF880Q6PDB4 577 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms