RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 OR10W1Q8NGF6 305 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 SIGMAR1Q99720 223 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 SFXN3Q9BWM7 321 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 TECRQ9NZ01 308 aaKnown RBP4.83□□□□□ -1.64
RFFL-202ENST00000394597 SPRR3Q9UBC9 169 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 CHTOPQ9Y3Y2 248 aaKnown RBP4.83□□□□□ -1.64
RFFL-202ENST00000394597 ESPL1Q14674 2120 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 COL6A6A6NMZ7 2263 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 K7EQM0 130 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 SCGB2A1O75556 95 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 BCL3P20749 454 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 FAM19A2Q8N3H0 131 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 PAQR4Q8N4S7 273 aaPredicted RBP4.83□□□□□ -1.64
RFFL-202ENST00000394597 OR10V1Q8NGI7 309 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 OR2T6Q8NHC8 308 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 H1FXQ92522 213 aaKnown RBP4.83□□□□□ -1.64
RFFL-202ENST00000394597 TMEM30CPA0ZSE6 113 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 CDIPTO14735 213 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 ZNHIT1O43257 154 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 APCSP02743 223 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 CD55P08174 381 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 SUPT4H1P63272 117 aaKnown RBP4.83□□□□□ -1.64
RFFL-202ENST00000394597 TNFAIP6P98066 277 aaPredicted RBP4.83□□□□□ -1.64
RFFL-202ENST00000394597 TMEM187Q14656 261 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 WDFY1Q8IWB7 410 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 LRRC29Q8WV35 223 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 TMEM204Q9BSN7 226 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 CSTL1Q9H114 145 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 GTSF1LQ9H1H1 148 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 OR2D2Q9H210 308 aa4.83□□□□□ -1.64
RFFL-202ENST00000394597 VENTXO95231 258 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 CA2P00918 260 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 NGFP01138 241 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 CD3EP07766 207 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 HIST1H1EP10412 219 aaKnown RBP4.82□□□□□ -1.64
RFFL-202ENST00000394597 HTR1DP28221 377 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 KLRB1Q12918 225 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 ACSF3Q4G176 576 aaPredicted RBP4.82□□□□□ -1.64
RFFL-202ENST00000394597 Q6ZVH6 145 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 FAM57AQ8TBR7 257 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 TIMD4Q96H15 378 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 SH2D2AQ9NP31 389 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 YTHDF2Q9Y5A9 579 aaKnown RBP4.82□□□□□ -1.64
RFFL-202ENST00000394597 PCDH15Q96QU1 1955 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 A0A1B0GUS0 222 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 ODAMA1E959 279 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 J3QW42 95 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 SS18L1O75177 396 aaPredicted RBP4.82□□□□□ -1.64
RFFL-202ENST00000394597 WISP1O95388 367 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 OR5AL1P0C617 328 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 CEACAM6P40199 344 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 RELBQ01201 579 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 H2BFWTQ7Z2G1 175 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 GAPTQ8N292 157 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 C9orf106Q8NAJ2 232 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 OR8B3Q8NGG8 313 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 GALMQ96C23 342 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 TMEM147Q9BVK8 224 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 MAP1LC3CQ9BXW4 147 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 FNDC4Q9H6D8 234 aaPredicted RBP4.82□□□□□ -1.64
RFFL-202ENST00000394597 ERRFI1Q9UJM3 462 aaPredicted RBP4.82□□□□□ -1.64
RFFL-202ENST00000394597 SLC45A2Q9UMX9 530 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 ADAMTS9Q9P2N4 1935 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 KIR2DL5BA0A0G2JN68 375 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 KIR2DL5BA0A0G2JPC4 375 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 TMEM14DPA8MWL7 114 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 RPL36A-HNRNPH2H7BZ11 118 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 STAG3L3P0CL85 134 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 LYL1P12980 280 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 IGFBP3P17936 291 aaPredicted RBP4.82□□□□□ -1.64
RFFL-202ENST00000394597 TSPOP30536 169 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 UBE2G1P62253 170 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 PIGYQ3MUY2 71 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 KIR2DL5AQ8N109 375 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 PNKDQ8N490 385 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 C1orf162Q8NEQ5 155 aaPredicted RBP4.82□□□□□ -1.64
RFFL-202ENST00000394597 OR4D5Q8NGN0 318 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 SFRP2Q96HF1 295 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 OR4C12Q96R67 309 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 C1QTNF5Q9BXJ0 243 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 SEPSECSQ9HD40 501 aaKnown RBP4.82□□□□□ -1.64
RFFL-202ENST00000394597 LIN7CQ9NUP9 197 aaKnown RBP4.82□□□□□ -1.64
RFFL-202ENST00000394597 DLL3Q9NYJ7 618 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 HSPB8Q9UJY1 196 aa4.82□□□□□ -1.64
RFFL-202ENST00000394597 TMEM131Q92545 1883 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 FAM87AP0C7U9 286 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 CKS1BP61024 79 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 ACTL10Q5JWF8 245 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 FA2HQ7L5A8 372 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 LINC00596Q86U02 117 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 LYG1Q8N1E2 194 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 PRR7Q8TB68 274 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 SPRY4Q9C004 299 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 TMEM222Q9H0R3 208 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 CLEC5AQ9NY25 188 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 IGHV1-69-2A0A0G2JMI3 117 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 PPIAL4DF5H284 164 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 ACTL6BO94805 426 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 CSN3P07498 182 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 IGHV1-2P23083 117 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms