RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TRBV24-1A0A075B6N3 115 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 SPRY3O43610 288 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 KITLGP21583 273 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 GALR1P47211 349 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 MORN2Q502X0 79 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 PRAMEF5Q5TYX0 476 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 PRR7Q8TB68 274 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 FAM122AQ96E09 287 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 DCAF16Q9NXF7 216 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 ARFGEF3Q5TH69 2177 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 RELNP78509 3460 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 A0A1B0GUS0 222 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 IFNA10P01566 189 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 GNB1P62873 340 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 MIC13Q5XKP0 118 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 CISD2Q8N5K1 135 aaKnown RBP11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 OR10A7Q8NGE5 316 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 SSMEM1Q8WWF3 244 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 C1orf159Q96HA4 380 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 ACTR3CQ9C0K3 210 aaPredicted RBP11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 TMEM242Q9NWH2 141 aa11.14□□□□□ -0.63
GTF2F1-201ENST00000394456 C11orf94C9JXX5 98 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 H7BYZ3 331 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 SPINT2O43291 252 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 OPN1MWP04001 364 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 OPN1MW2P0DN77 364 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 OPN1MW3P0DN78 364 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 CDC34P49427 236 aaPredicted RBP11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 FAM27E3Q08E93 113 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 SPATA31B1PQ5VZV4 182 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 CST9LP1Q5W188 147 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 ZNF709Q8N972 641 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 DEFB108BQ8NET1 73 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 OR13D1Q8NGV5 346 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 TMEM37Q8WXS4 190 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 LURAP1Q96LR2 239 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 OR2V2Q96R30 315 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 MRPL37Q9BZE1 423 aaKnown RBP11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 MS4A5Q9H3V2 200 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 GFOD1Q9NXC2 390 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 C1QTNF9P0C862 333 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 CD1BP29016 333 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 LOXL3P58215 753 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 VWC2Q2TAL6 325 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 FAM90A1Q86YD7 464 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 SPACA3Q8IXA5 215 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 PFDN5Q99471 154 aa11.13□□□□□ -0.63
GTF2F1-201ENST00000394456 DSCAMO60469 2012 aa11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 PIGBOS1A0A0B4J2F0 54 aa11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 NDUFB4O95168 129 aa11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 MBNL2Q5VZF2 373 aaKnown RBP11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 FAM57AQ8TBR7 257 aa11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 PACRGQ96M98 296 aaPredicted RBP11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 HSD17B10Q99714 261 aaKnown RBP11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 IFI27L2Q9H2X8 130 aa11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 HEYLQ9NQ87 328 aaPredicted RBP11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 TNCP24821 2201 aa11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 TIMM23BQ5SRD1 257 aa11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 ZNF66Q6ZN08 573 aa11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 MGST2Q99735 147 aa11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 WDR83OSQ9Y284 106 aa11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 DMRT1Q9Y5R6 373 aa11.12□□□□□ -0.63
GTF2F1-201ENST00000394456 TRBV20OR9-2A0A075B6H5 130 aa11.11□□□□□ -0.63
GTF2F1-201ENST00000394456 SRRM5B3KS81 715 aa11.11□□□□□ -0.63
GTF2F1-201ENST00000394456 TIMP3P35625 211 aa11.11□□□□□ -0.63
GTF2F1-201ENST00000394456 GNB2P62879 340 aa11.11□□□□□ -0.63
GTF2F1-201ENST00000394456 ATP6V1FQ16864 119 aa11.11□□□□□ -0.63
GTF2F1-201ENST00000394456 TREML4Q6UXN2 200 aa11.11□□□□□ -0.63
GTF2F1-201ENST00000394456 MOB3BQ86TA1 216 aa11.11□□□□□ -0.63
GTF2F1-201ENST00000394456 ITLN1Q8WWA0 313 aa11.11□□□□□ -0.63
GTF2F1-201ENST00000394456 NEIL1Q96FI4 390 aaPredicted RBP11.11□□□□□ -0.63
GTF2F1-201ENST00000394456 FUT9Q9Y231 359 aa11.11□□□□□ -0.63
GTF2F1-201ENST00000394456 MMP23AO75900 390 aa11.11□□□□□ -0.63
GTF2F1-201ENST00000394456 RELBQ01201 579 aa11.11□□□□□ -0.63
GTF2F1-201ENST00000394456 PKDREJQ9NTG1 2253 aa11.11□□□□□ -0.63
GTF2F1-201ENST00000394456 AMBPP02760 352 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 ARL14EPLP0DKL9 152 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 VDAC2P45880 294 aaPredicted RBP11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 KRTCAP3Q53RY4 240 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 Q8NA96 180 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 OR4A16Q8NH70 328 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 SRD5A3Q9H8P0 318 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 TMEM140Q9NV12 185 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 NBASA2RRP1 2371 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 A0A0U1RQK1 487 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 TMEM250H0YL14 139 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 RBFOX2O43251 390 aaKnown RBP eCLIP11.1□□□□□ -0.631e-5■■■■□ 20.3
GTF2F1-201ENST00000394456 GFRA3O60609 400 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 FOXH1O75593 365 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 CEACAM8P31997 349 aaPredicted RBP11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 GNG10P50151 68 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 PRR30Q53SZ7 412 aaPredicted RBP11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 CT45A1Q5HYN5 189 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 FAM78BQ5VT40 261 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 CT45A3Q8NHU0 189 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 CIB3Q96Q77 187 aaPredicted RBP11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 PYGO2Q9BRQ0 406 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 SFXN3Q9BWM7 321 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 HINT2Q9BX68 163 aa11.1□□□□□ -0.63
GTF2F1-201ENST00000394456 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms