RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 ZFHX4Q86UP3 3567 aa11.54□□□□□ -0.56
GAPVD1-205ENST00000394084 TRBV20OR9-2A0A075B6H5 130 aa11.54□□□□□ -0.56
GAPVD1-205ENST00000394084 SCO2A0A1W2PP80 73 aa11.54□□□□□ -0.56
GAPVD1-205ENST00000394084 ZNF891A8MT65 544 aaPredicted RBP11.54□□□□□ -0.56
GAPVD1-205ENST00000394084 RBFOX2O43251 390 aaKnown RBP eCLIP11.54□□□□□ -0.56
GAPVD1-205ENST00000394084 RNF224P0DH78 156 aa11.54□□□□□ -0.56
GAPVD1-205ENST00000394084 VHLLQ6RSH7 139 aa11.54□□□□□ -0.56
GAPVD1-205ENST00000394084 C1orf229Q6ZS94 237 aaPredicted RBP11.54□□□□□ -0.56
GAPVD1-205ENST00000394084 TCF23Q7RTU1 214 aa11.54□□□□□ -0.56
GAPVD1-205ENST00000394084 RNASEH2CQ8TDP1 164 aaKnown RBP11.54□□□□□ -0.56
GAPVD1-205ENST00000394084 S1PR3Q99500 378 aa11.54□□□□□ -0.56
GAPVD1-205ENST00000394084 TRAPPC1Q9Y5R8 145 aa11.54□□□□□ -0.56
GAPVD1-205ENST00000394084 GFRA3O60609 400 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 VDAC2P45880 294 aaPredicted RBP11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 THBS3P49746 956 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 GUSBP1Q15486 140 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 SPATA31B1PQ5VZV4 182 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 SGMS2Q8NHU3 365 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 GGTLC1Q9BX51 225 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 HINT2Q9BX68 163 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 KCNIP2Q9NS61 270 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 F6UZH7 168 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 IGHG3P01860 377 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 MYOD1P15172 320 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 CNN1P51911 297 aaKnown RBP11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 RELBQ01201 579 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 TYMSP04818 313 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 SNRPCP09234 159 aaKnown RBP11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 PLA2G2CQ5R387 149 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 TMEM18Q96B42 140 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 IFI27L2Q9H2X8 130 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 TCF19Q9Y242 345 aa11.53□□□□□ -0.56
GAPVD1-205ENST00000394084 MDFIC2A0A1B0GVS7 189 aa11.52□□□□□ -0.57
GAPVD1-205ENST00000394084 OPRK1P41145 380 aa11.52□□□□□ -0.57
GAPVD1-205ENST00000394084 ZNF83P51522 516 aa11.52□□□□□ -0.57
GAPVD1-205ENST00000394084 RPP30P78346 268 aaKnown RBP11.52□□□□□ -0.57
GAPVD1-205ENST00000394084 MOGAT3Q86VF5 341 aa11.52□□□□□ -0.57
GAPVD1-205ENST00000394084 GCSAMQ8N6F7 178 aa11.52□□□□□ -0.57
GAPVD1-205ENST00000394084 JPT1Q9UK76 154 aa11.52□□□□□ -0.57
GAPVD1-205ENST00000394084 PDLIM4P50479 330 aa11.52□□□□□ -0.57
GAPVD1-205ENST00000394084 TRAT1Q6PIZ9 186 aa11.52□□□□□ -0.57
GAPVD1-205ENST00000394084 FAM90A1Q86YD7 464 aa11.52□□□□□ -0.57
GAPVD1-205ENST00000394084 TMEM256Q8N2U0 113 aa11.52□□□□□ -0.57
GAPVD1-205ENST00000394084 RAB1CQ92928 201 aa11.52□□□□□ -0.57
GAPVD1-205ENST00000394084 SFRP2Q96HF1 295 aa11.52□□□□□ -0.57
GAPVD1-205ENST00000394084 SRRM5B3KS81 715 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 TMPRSS2O15393 492 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 OR4A8P0C604 315 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 STAG3L2P0CL84 134 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 STAG3L3P0CL85 134 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 LOXL3P58215 753 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 YTHDF2Q9Y5A9 579 aaKnown RBP11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 BDP1A6H8Y1 2624 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 MGST3O14880 152 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 SPRY3O43610 288 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 RPL15P61313 204 aaKnown RBP11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 OCC1Q8TAD7 63 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 OR2V2Q96R30 315 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 SEPSECSQ9HD40 501 aaKnown RBP11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 RP1L1Q8IWN7 2480 aaPredicted RBP11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 PRSS46E5RG02 174 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 MPDU1O75352 247 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 LCN2P80188 198 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 USF2Q15853 346 aaPredicted RBP11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 MBNL2Q5VZF2 373 aaKnown RBP11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 DUX4L9Q6RFH8 374 aaPredicted RBP11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 C1orf159Q96HA4 380 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 CFAP47Q6ZTR5 3102 aa11.51□□□□□ -0.57
GAPVD1-205ENST00000394084 A8MWP6 167 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 NUPR1O60356 82 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 YPEL1O60688 119 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 FOXH1O75593 365 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 CXorf1O96002 111 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 GCGP01275 180 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 IL6RP08887 468 aaPredicted RBP11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 NDUFB7P17568 137 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 SSX2Q16385 188 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 ARSJQ5FYB0 599 aaPredicted RBP11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 BHLHA15Q7RTS1 189 aaPredicted RBP11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 TMEM144Q7Z5S9 345 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 C1orf162Q8NEQ5 155 aaPredicted RBP11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 FAM122AQ96E09 287 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 YPEL2Q96QA6 119 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 CALYQ9NYX4 217 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 PROCRQ9UNN8 238 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 PRR33A8MZF0 331 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 ACTL6BO94805 426 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 IGLV1-44P01699 117 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 WT1P19544 449 aaPredicted RBP11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 PPP1R35Q8TAP8 253 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 MISP3Q96FF7 219 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 IMMP2LQ96T52 175 aa11.5□□□□□ -0.57
GAPVD1-205ENST00000394084 GRIFINA4D1Z8 144 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 M0R1B8 84 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 M0R296 226 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 SLC17A3O00476 420 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 SCGB1D1O95968 90 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 AARDQ4LEZ3 155 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 GBGT1Q8N5D6 347 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 STPG3Q8N7X2 389 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms