RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 ACSM6Q6P461 480 aa12.15□□□□□ -0.47
CDH16-202ENST00000394055 TCTEX1D1Q8N7M0 179 aa12.15□□□□□ -0.47
CDH16-202ENST00000394055 TMEM208Q9BTX3 173 aa12.15□□□□□ -0.47
CDH16-202ENST00000394055 OR6C3Q9NZP0 311 aa12.15□□□□□ -0.47
CDH16-202ENST00000394055 RAI1Q7Z5J4 1906 aaPredicted RBP12.14□□□□□ -0.47
CDH16-202ENST00000394055 MAP1LC3B2A6NCE7 125 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 SERF2P84101 59 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 C3orf36Q3SXR2 165 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 GFRALQ6UXV0 394 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 Q8NA96 180 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 TMEM147Q9BVK8 224 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 MAP1LC3BQ9GZQ8 125 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 SLC25A22Q9H936 323 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 TRAV3A0A0B4J244 114 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 TRAV1-1A0A0B4J248 108 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 F2RL2O00254 374 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 DEFA4P12838 97 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 TMEM11P17152 192 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 TDGF1P3P51864 188 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 RPP25LQ8N5L8 163 aaKnown RBP12.14□□□□□ -0.47
CDH16-202ENST00000394055 LRFN3Q9BTN0 628 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 IL19Q9UHD0 177 aa12.14□□□□□ -0.47
CDH16-202ENST00000394055 YLPM1P49750 1951 aaKnown RBP12.13□□□□□ -0.47
CDH16-202ENST00000394055 C16orf97H3BN30 126 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 LINC00614P0C842 121 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 BCL2P10415 239 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 FABP4P15090 132 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 TAGLN2P37802 199 aaKnown RBP12.13□□□□□ -0.47
CDH16-202ENST00000394055 GATA4P43694 442 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 CR1LQ2VPA4 569 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 GFI1BQ5VTD9 330 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 DYSFO75923 2080 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 PRSS47A8MTI9 375 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 OR2C1O95371 312 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 HPRT1P00492 218 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 CT45A1Q5HYN5 189 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 STUMQ69YW2 141 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 TMEM108Q6UXF1 575 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 HIST3H2BBQ8N257 126 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 OR5R1Q8NH85 324 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 CT45A3Q8NHU0 189 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 MBD3L1Q8WWY6 194 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 GAFA1Q96PS6 74 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 S1PR3Q99500 378 aa12.13□□□□□ -0.47
CDH16-202ENST00000394055 SOD3P08294 240 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 TNFSF4P23510 183 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 ERVFRD-1P60508 538 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 DLK1P80370 383 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 HEPN1Q6WQI6 88 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 TCF23Q7RTU1 214 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 OR4A16Q8NH70 328 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 LHX4Q969G2 390 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 CIB3Q96Q77 187 aaPredicted RBP12.12□□□□□ -0.47
CDH16-202ENST00000394055 NIPSNAP3BQ9BS92 247 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 SNHG12Q9BXW3 62 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 SLC39A9Q9NUM3 307 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 DPRXA6NFQ7 191 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 C15orf62A8K5M9 175 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 MMP23AO75900 390 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 MRGPRGQ86SM5 289 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 SPACA3Q8IXA5 215 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 LYG1Q8N1E2 194 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 FAM222BQ8WU58 562 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 PINX1Q96BK5 328 aaKnown RBP12.12□□□□□ -0.47
CDH16-202ENST00000394055 HIPK2Q9H2X6 1198 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 ZNRD1Q9P1U0 126 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 DSCAML1Q8TD84 2053 aa12.12□□□□□ -0.47
CDH16-202ENST00000394055 SAA2-SAA4A0A096LPE2 208 aa12.11□□□□□ -0.47
CDH16-202ENST00000394055 TRGV10A0A0A0MS01 117 aa12.11□□□□□ -0.47
CDH16-202ENST00000394055 KBTBD11-OT1A0A1B0GTJ5 212 aa12.11□□□□□ -0.47
CDH16-202ENST00000394055 SAA2P0DJI9 122 aaPredicted RBP12.11□□□□□ -0.47
CDH16-202ENST00000394055 CGB3P0DN86 165 aa12.11□□□□□ -0.47
CDH16-202ENST00000394055 CGB7P0DN87 165 aa12.11□□□□□ -0.47
CDH16-202ENST00000394055 BSPH1Q075Z2 132 aa12.11□□□□□ -0.47
CDH16-202ENST00000394055 FFAR4Q5NUL3 377 aa12.11□□□□□ -0.47
CDH16-202ENST00000394055 PARD6GQ9BYG4 376 aaPredicted RBP12.11□□□□□ -0.47
CDH16-202ENST00000394055 OR4A8P0C604 315 aa12.11□□□□□ -0.47
CDH16-202ENST00000394055 IRF2P14316 349 aa12.11□□□□□ -0.47
CDH16-202ENST00000394055 ERVK-16P61578 105 aa12.11□□□□□ -0.47
CDH16-202ENST00000394055 MRPS11P82912 194 aaKnown RBP12.11□□□□□ -0.47
CDH16-202ENST00000394055 MAJINQ3KP22 176 aa12.11□□□□□ -0.47
CDH16-202ENST00000394055 SDSLQ96GA7 329 aa12.11□□□□□ -0.47
CDH16-202ENST00000394055 TMEM140Q9NV12 185 aa12.11□□□□□ -0.47
CDH16-202ENST00000394055 URGCP-MRPS24S4R325 110 aa12.11□□□□□ -0.47
CDH16-202ENST00000394055 TLN1Q9Y490 2541 aaKnown RBP12.11□□□□□ -0.47
CDH16-202ENST00000394055 ELOA3CA0A087WX78 387 aaPredicted RBP12.1□□□□□ -0.47
CDH16-202ENST00000394055 TMPRSS2O15393 492 aa12.1□□□□□ -0.47
CDH16-202ENST00000394055 ATP6V1FQ16864 119 aa12.1□□□□□ -0.47
CDH16-202ENST00000394055 ZNF674Q2M3X9 581 aa12.1□□□□□ -0.47
CDH16-202ENST00000394055 FAM90A2PQ658T7 463 aa12.1□□□□□ -0.47
CDH16-202ENST00000394055 ZNF343Q6P1L6 599 aa12.1□□□□□ -0.47
CDH16-202ENST00000394055 ZNF664Q8N3J9 261 aa12.1□□□□□ -0.47
CDH16-202ENST00000394055 TVP23CQ96ET8 276 aa12.1□□□□□ -0.47
CDH16-202ENST00000394055 NPCDR1Q9BY65 106 aa12.1□□□□□ -0.47
CDH16-202ENST00000394055 CISD1Q9NZ45 108 aaKnown RBP12.1□□□□□ -0.47
CDH16-202ENST00000394055 TANC2Q9HCD6 1990 aa12.1□□□□□ -0.47
CDH16-202ENST00000394055 SMCO3A2RU48 225 aa12.1□□□□□ -0.47
CDH16-202ENST00000394055 THBDP07204 575 aa12.1□□□□□ -0.47
CDH16-202ENST00000394055 GAGE1Q13065 139 aa12.1□□□□□ -0.47
CDH16-202ENST00000394055 ADIPOQQ15848 244 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms