RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 UNQ9165/PRO28630Q6UXU0 137 aa11.42□□□□□ -0.58
CHMP3-202ENST00000393773 Q6ZWC4 215 aa11.42□□□□□ -0.58
CHMP3-202ENST00000393773 PUSL1Q8N0Z8 303 aaKnown RBP11.42□□□□□ -0.58
CHMP3-202ENST00000393773 OR10R2Q8NGX6 335 aa11.42□□□□□ -0.58
CHMP3-202ENST00000393773 TMEM167AQ8TBQ9 72 aa11.42□□□□□ -0.58
CHMP3-202ENST00000393773 FYTTD1Q96QD9 318 aaKnown RBP11.42□□□□□ -0.58
CHMP3-202ENST00000393773 SLC2A9Q9NRM0 540 aa11.42□□□□□ -0.58
CHMP3-202ENST00000393773 RAB22AQ9UL26 194 aa11.42□□□□□ -0.58
CHMP3-202ENST00000393773 PKHD1P08F94 4074 aa11.42□□□□□ -0.58
CHMP3-202ENST00000393773 FAT2Q9NYQ8 4349 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 TRAV25A0A0B4J276 109 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 ZNF320A2RRD8 509 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 MFSD2BA6NFX1 497 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 RAB27BO00194 218 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 C8orf88P0DMB2 117 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 CTRB1P17538 263 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 MAP2K4P45985 399 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 EIF4EBP1Q13541 118 aaPredicted RBP11.41□□□□□ -0.58
CHMP3-202ENST00000393773 ARFRP1Q13795 201 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 FAM106AQ4KMX7 169 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 CTRB2Q6GPI1 263 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 OR4A47Q6IF82 309 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 OR1L6Q8NGR2 347 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 EEF1AKMT3Q96AZ1 226 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 OR51E2Q9H255 320 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 MRPS7Q9Y2R9 242 aaKnown RBP11.41□□□□□ -0.58
CHMP3-202ENST00000393773 RBMX2Q9Y388 322 aaKnown RBP11.41□□□□□ -0.58
CHMP3-202ENST00000393773 V9GY05 133 aa11.41□□□□□ -0.58
CHMP3-202ENST00000393773 IGLV11-55A0A075B6I3 123 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 A0A075B6Q4 140 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 PTGES3LE9PB15 166 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 SPRY2O43597 315 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 GADD45AP24522 165 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 PSMA1P25786 263 aaKnown RBP11.4□□□□□ -0.58
CHMP3-202ENST00000393773 PSMB6P28072 239 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 APOC4P55056 127 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 BRWD1-AS2P59051 145 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 FABP5Q01469 135 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 TRAM1Q15629 374 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 OGFRL1Q5TC84 451 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-202ENST00000393773 OR4S2Q8NH73 311 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 VSTM2AQ8TAG5 236 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 MARC2Q969Z3 335 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 OR2A7Q96R45 310 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 DCUN1D5Q9BTE7 237 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 ELF5Q9UKW6 265 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-202ENST00000393773 KLK5Q9Y337 293 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-202ENST00000393773 PRELID3BQ9Y3B1 194 aa11.4□□□□□ -0.58
CHMP3-202ENST00000393773 IGKV1D-13A0A0B4J2D9 117 aa11.39□□□□□ -0.59
CHMP3-202ENST00000393773 DPPA5A6NC42 116 aa11.39□□□□□ -0.59
CHMP3-202ENST00000393773 CGB1A6NKQ9 187 aa11.39□□□□□ -0.59
CHMP3-202ENST00000393773 J3QRK9 145 aa11.39□□□□□ -0.59
CHMP3-202ENST00000393773 HLA-DQB1P01920 261 aa11.39□□□□□ -0.59
CHMP3-202ENST00000393773 IGKV1-13P0DP09 117 aa11.39□□□□□ -0.59
CHMP3-202ENST00000393773 CD36P16671 472 aa11.39□□□□□ -0.59
CHMP3-202ENST00000393773 MAS1LP35410 378 aa11.39□□□□□ -0.59
CHMP3-202ENST00000393773 ODF3L2Q3SX64 289 aa11.39□□□□□ -0.59
CHMP3-202ENST00000393773 SPAG8Q99932 426 aaPredicted RBP11.39□□□□□ -0.59
CHMP3-202ENST00000393773 TRBV7-1A0A0A6YYK4 115 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 S1PR2O95136 353 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 REG1AP05451 166 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 HSMCR30P0CW71 290 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 MYOD1P15172 320 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 RAB6AP20340 208 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 GALP22466 123 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 NFYAP23511 347 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-202ENST00000393773 DTYMKP23919 212 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 OR10A3P58181 314 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 MLLT11Q13015 90 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-202ENST00000393773 RCN1Q15293 331 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 LGALS9CQ6DKI2 356 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 OR2C3Q8N628 320 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 RNF183Q96D59 192 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 CENPOQ9BU64 300 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 MRPL27Q9P0M9 148 aaKnown RBP11.38□□□□□ -0.59
CHMP3-202ENST00000393773 UBQLN2Q9UHD9 624 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 OR2W1Q9Y3N9 320 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 DNAH2Q9P225 4427 aa11.38□□□□□ -0.59
CHMP3-202ENST00000393773 DNAH17Q9UFH2 4485 aa11.37□□□□□ -0.59
CHMP3-202ENST00000393773 KIR2DL5BA0A0G2JN68 375 aa11.37□□□□□ -0.59
CHMP3-202ENST00000393773 KIR2DL5BA0A0G2JPC4 375 aa11.37□□□□□ -0.59
CHMP3-202ENST00000393773 CASQ2O14958 399 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-202ENST00000393773 DHFRP00374 187 aa11.37□□□□□ -0.59
CHMP3-202ENST00000393773 HIST1H1BP16401 226 aaKnown RBP11.37□□□□□ -0.59
CHMP3-202ENST00000393773 GPR183P32249 361 aa11.37□□□□□ -0.59
CHMP3-202ENST00000393773 RANBP1P43487 201 aa11.37□□□□□ -0.59
CHMP3-202ENST00000393773 ELLP55199 621 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-202ENST00000393773 ZNF585BQ52M93 769 aa11.37□□□□□ -0.59
CHMP3-202ENST00000393773 RBPMS2Q6ZRY4 209 aaKnown RBP11.37□□□□□ -0.59
CHMP3-202ENST00000393773 KIR2DL5AQ8N109 375 aa11.37□□□□□ -0.59
CHMP3-202ENST00000393773 KIR2DL5BQ8NHK3 375 aa11.37□□□□□ -0.59
CHMP3-202ENST00000393773 ZNF502Q8TBZ5 544 aa11.37□□□□□ -0.59
CHMP3-202ENST00000393773 PHLDA1Q8WV24 401 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-202ENST00000393773 TCTEX1D2Q8WW35 142 aa11.37□□□□□ -0.59
CHMP3-202ENST00000393773 TMEM190Q8WZ59 177 aa11.37□□□□□ -0.59
CHMP3-202ENST00000393773 CXorf58Q96LI9 332 aa11.37□□□□□ -0.59
CHMP3-202ENST00000393773 ZNF436Q9C0F3 470 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-202ENST00000393773 C5orf66Q9H5L9 145 aa11.37□□□□□ -0.59
CHMP3-202ENST00000393773 IGHV3-35A0A0C4DH35 117 aa11.36□□□□□ -0.59
CHMP3-202ENST00000393773 IFITM5A6NNB3 132 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms