RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 MS4A7Q9GZW8 240 aaPredicted RBP7□□□□□ -1.29
TDP1-203ENST00000393454 HEYLQ9NQ87 328 aaPredicted RBP7□□□□□ -1.29
TDP1-203ENST00000393454 ITGB1BP2Q9UKP3 347 aa7□□□□□ -1.29
TDP1-203ENST00000393454 STRAPQ9Y3F4 350 aaKnown RBP7□□□□□ -1.29
TDP1-203ENST00000393454 OR51B2Q9Y5P1 312 aa7□□□□□ -1.29
TDP1-203ENST00000393454 KPTNQ9Y664 436 aa7□□□□□ -1.29
TDP1-203ENST00000393454 USP9YO00507 2555 aaPredicted RBP7□□□□□ -1.29
TDP1-203ENST00000393454 IGHV4-30-2A0A087WSY4 118 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 RPS10-NUDT3A0A1W2PQS6 291 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 FAM157AC9JC47 383 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 UPK2O00526 184 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 TOX4O94842 621 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 CEACAM3P40198 252 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 HOXA1P49639 335 aaPredicted RBP6.99□□□□□ -1.29
TDP1-203ENST00000393454 POU2AF1Q16633 256 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 EIF5AL1Q6IS14 154 aaKnown RBP6.99□□□□□ -1.29
TDP1-203ENST00000393454 SLC25A24Q6NUK1 477 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 UBAC2Q8NBM4 344 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 HSD17B11Q8NBQ5 300 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 SLC25A32Q9H2D1 315 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 HIPK2Q9H2X6 1198 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 ENY2Q9NPA8 101 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 DPM3Q9P2X0 92 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 PRNDQ9UKY0 176 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 TCF19Q9Y242 345 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 HILPDAQ9Y5L2 63 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 TET2Q6N021 2002 aaPredicted RBP6.99□□□□□ -1.29
TDP1-203ENST00000393454 KBTBD11O94819 623 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 OPN1MWP04001 364 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 NMBP08949 121 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 OPN1MW2P0DN77 364 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 OPN1MW3P0DN78 364 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 MYOD1P15172 320 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 DVL1P1P54792 670 aaPredicted RBP6.99□□□□□ -1.29
TDP1-203ENST00000393454 LGALS4P56470 323 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 HSPE1P61604 102 aaKnown RBP6.99□□□□□ -1.29
TDP1-203ENST00000393454 HBG1P69891 147 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 HBG2P69892 147 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 PAX2Q02962 417 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 ZNF266Q14584 549 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 VMA21Q3ZAQ7 101 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 TPTE2P1Q5T6R2 138 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 HCP5Q6MZN7 132 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 ZNF429Q86V71 674 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 LILRB2Q8N423 598 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 OR52E5Q8NH55 327 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 RITA1Q96K30 269 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 OR4C12Q96R67 309 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 TSNAXQ99598 290 aaKnown RBP6.99□□□□□ -1.29
TDP1-203ENST00000393454 SIRPDQ9H106 197 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 BET1LQ9NYM9 111 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 CACFD1Q9UGQ2 172 aa6.99□□□□□ -1.29
TDP1-203ENST00000393454 FOXA2Q9Y261 457 aaPredicted RBP6.99□□□□□ -1.29
TDP1-203ENST00000393454 ANKRD17O75179 2603 aaKnown RBP6.98□□□□□ -1.29
TDP1-203ENST00000393454 VWC2LB2RUY7 222 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 RNASEK-C17orf49H0YIS7 233 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 LY6LH3BQJ8 138 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 DFFBO76075 338 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 IFNA10P01566 189 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 IFNA5P01569 189 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 FGF2P09038 288 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 HOXB4P17483 251 aaPredicted RBP6.98□□□□□ -1.29
TDP1-203ENST00000393454 DSCR9P59020 149 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 KRTAP10-9P60411 292 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 RPP30P78346 268 aaKnown RBP6.98□□□□□ -1.29
TDP1-203ENST00000393454 ARL16Q0P5N6 197 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 AARDQ4LEZ3 155 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 LHFPL4Q7Z7J7 247 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 PUSL1Q8N0Z8 303 aaKnown RBP6.98□□□□□ -1.29
TDP1-203ENST00000393454 MARVELD3Q96A59 401 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 CXorf58Q96LI9 332 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 CITED4Q96RK1 184 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 ATP5SQ99766 215 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 TMEM14BQ9NUH8 114 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 FKBP11Q9NYL4 201 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 TENM4Q6N022 2769 aa6.98□□□□□ -1.29
TDP1-203ENST00000393454 LINC00862A6NCI5 91 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 ODF3BA8MYP8 253 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 SLC25A17O43808 307 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 LY86O95711 162 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 IL6RP08887 468 aaPredicted RBP6.97□□□□□ -1.29
TDP1-203ENST00000393454 USF1P22415 310 aaPredicted RBP6.97□□□□□ -1.29
TDP1-203ENST00000393454 PAX6P26367 422 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 LGALS7P47929 136 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 RPL8P62917 257 aaKnown RBP6.97□□□□□ -1.29
TDP1-203ENST00000393454 SLC38A11Q08AI6 406 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 SSX2Q16385 188 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 CLEC12BQ2HXU8 276 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 LDLRAD2Q5SZI1 272 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 TMEM14EPQ6UXP3 125 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 HAPLN4Q86UW8 402 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 COMMD7Q86VX2 200 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 VSTM2AQ8TAG5 236 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 SCGB1C1Q8TD33 95 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 RNF141Q8WVD5 230 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 GINS3Q9BRX5 216 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 COMMD5Q9GZQ3 224 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 SH3BGRL3Q9H299 93 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 ASH1LQ9NR48 2969 aaKnown RBP6.97□□□□□ -1.29
TDP1-203ENST00000393454 TEX50A0A1B0GTY4 177 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms