RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 GRPP07492 148 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 Q0VG73 95 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 MRPL49Q13405 166 aaKnown RBP12.54□□□□□ -0.4
SHTN1-204ENST00000392903 MMDQ15546 238 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 DEFB109BQ30KR1 87 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 ZNF114Q8NC26 417 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 C22orf15Q8WYQ4 148 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 RNF2Q99496 336 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 DERL1Q9BUN8 251 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 HSPB7Q9UBY9 170 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 EGR1P18146 543 aa12.53□□□□□ -0.4
SHTN1-204ENST00000392903 GABRA6Q16445 453 aa12.53□□□□□ -0.4
SHTN1-204ENST00000392903 CXorf67Q86X51 503 aaPredicted RBP12.53□□□□□ -0.4
SHTN1-204ENST00000392903 RNASE8Q8TDE3 154 aaKnown RBP12.53□□□□□ -0.4
SHTN1-204ENST00000392903 RTL8AQ9BWD3 113 aa12.53□□□□□ -0.4
SHTN1-204ENST00000392903 PMS2P5A8MQ11 134 aa12.53□□□□□ -0.4
SHTN1-204ENST00000392903 KITLGP21583 273 aa12.53□□□□□ -0.4
SHTN1-204ENST00000392903 CBLN1P23435 193 aa12.53□□□□□ -0.4
SHTN1-204ENST00000392903 CDC34P49427 236 aaPredicted RBP12.53□□□□□ -0.4
SHTN1-204ENST00000392903 FOXF2Q12947 444 aa12.53□□□□□ -0.4
SHTN1-204ENST00000392903 PSG7Q13046 419 aa12.53□□□□□ -0.4
SHTN1-204ENST00000392903 LEMD1Q68G75 181 aa12.53□□□□□ -0.4
SHTN1-204ENST00000392903 STPG4Q8N801 248 aa12.53□□□□□ -0.4
SHTN1-204ENST00000392903 ZNF709Q8N972 641 aa12.53□□□□□ -0.4
SHTN1-204ENST00000392903 Q8N976 141 aa12.53□□□□□ -0.4
SHTN1-204ENST00000392903 MRPL18Q9H0U6 180 aaKnown RBP12.53□□□□□ -0.4
SHTN1-204ENST00000392903 PPP1R3CQ9UQK1 317 aa12.53□□□□□ -0.4
SHTN1-204ENST00000392903 J3QT63 122 aa12.52□□□□□ -0.4
SHTN1-204ENST00000392903 IGHG3P01860 377 aa12.52□□□□□ -0.4
SHTN1-204ENST00000392903 CRYAAP02489 173 aa12.52□□□□□ -0.4
SHTN1-204ENST00000392903 KLF3P57682 345 aaPredicted RBP12.52□□□□□ -0.4
SHTN1-204ENST00000392903 TFF3Q07654 80 aa12.52□□□□□ -0.4
SHTN1-204ENST00000392903 VWC2Q2TAL6 325 aa12.52□□□□□ -0.4
SHTN1-204ENST00000392903 Q6ZT83 130 aa12.52□□□□□ -0.4
SHTN1-204ENST00000392903 LINC00596Q86U02 117 aa12.52□□□□□ -0.4
SHTN1-204ENST00000392903 C1orf174Q8IYL3 243 aa12.52□□□□□ -0.4
SHTN1-204ENST00000392903 C9orf106Q8NAJ2 232 aa12.52□□□□□ -0.4
SHTN1-204ENST00000392903 SAMD10Q9BYL1 202 aa12.52□□□□□ -0.4
SHTN1-204ENST00000392903 PKIBQ9C010 78 aa12.52□□□□□ -0.4
SHTN1-204ENST00000392903 OR1A1Q9P1Q5 309 aa12.52□□□□□ -0.4
SHTN1-204ENST00000392903 PGPEP1LA6NFU8 196 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 NKX6-3A6NJ46 265 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 CCL25O15444 150 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 TIMP3P35625 211 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 MPV17P39210 176 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 ATP5G3P48201 142 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 Q6P435 159 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 BAGE3Q86Y29 109 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 BAGE2Q86Y30 109 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 FGFRL1Q8N441 504 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 OR1L1Q8NH94 360 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 UQCR10Q9UDW1 63 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 FBXL7Q9UJT9 491 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 FZR1Q9UM11 496 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 CADP27708 2225 aa12.52□□□□□ -0.41
SHTN1-204ENST00000392903 TRBV20OR9-2A0A075B6H5 130 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 OR2H2O95918 312 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 OR5G3P0C626 314 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 KIR2DL2P43627 348 aaPredicted RBP12.51□□□□□ -0.41
SHTN1-204ENST00000392903 CEBPDP49716 269 aaPredicted RBP12.51□□□□□ -0.41
SHTN1-204ENST00000392903 PTTG1IPP53801 180 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 OR10P1Q8NGE3 313 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 C17orf112F2Z3M2 114 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 K7EP13 123 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 NXPH2O95156 264 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 ZNF16P17020 682 aaPredicted RBP12.51□□□□□ -0.41
SHTN1-204ENST00000392903 SIGLECL1Q8N7X8 197 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 OR10G8Q8NGN5 311 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 KLF14Q8TD94 323 aaPredicted RBP12.51□□□□□ -0.41
SHTN1-204ENST00000392903 RAB1CQ92928 201 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 TXNDC17Q9BRA2 123 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 OBP2BQ9NPH6 170 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 ZNF586Q9NXT0 402 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 LAMTOR2Q9Y2Q5 125 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 ATMQ13315 3056 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 ICE1Q9Y2F5 2266 aa12.51□□□□□ -0.41
SHTN1-204ENST00000392903 DIRC3C9JPN6 131 aa12.5□□□□□ -0.41
SHTN1-204ENST00000392903 GPX1P07203 203 aa12.5□□□□□ -0.41
SHTN1-204ENST00000392903 DEFA4P12838 97 aa12.5□□□□□ -0.41
SHTN1-204ENST00000392903 CDKN1BP46527 198 aa12.5□□□□□ -0.41
SHTN1-204ENST00000392903 SUMO1P63165 101 aaKnown RBP12.5□□□□□ -0.41
SHTN1-204ENST00000392903 SPATA45Q537H7 98 aa12.5□□□□□ -0.41
SHTN1-204ENST00000392903 ALKBH2Q6NS38 261 aa12.5□□□□□ -0.41
SHTN1-204ENST00000392903 ZNF826PQ6ZT77 177 aa12.5□□□□□ -0.41
SHTN1-204ENST00000392903 TRAPPC2LQ9UL33 140 aa12.5□□□□□ -0.41
SHTN1-204ENST00000392903 RNF114Q9Y508 228 aa12.5□□□□□ -0.41
SHTN1-204ENST00000392903 TRAV17A0A0B4J275 112 aa12.5□□□□□ -0.41
SHTN1-204ENST00000392903 UBE2G2P60604 165 aa12.5□□□□□ -0.41
SHTN1-204ENST00000392903 ZNF90Q03938 601 aa12.5□□□□□ -0.41
SHTN1-204ENST00000392903 IL36BQ9NZH7 164 aa12.5□□□□□ -0.41
SHTN1-204ENST00000392903 PPIAL4AQ9Y536 164 aa12.5□□□□□ -0.41
SHTN1-204ENST00000392903 F2Z2F3 143 aa12.49□□□□□ -0.41
SHTN1-204ENST00000392903 TOMM40O96008 361 aa12.49□□□□□ -0.41
SHTN1-204ENST00000392903 IGLC2P0DOY2 106 aa12.49□□□□□ -0.41
SHTN1-204ENST00000392903 IGLC3P0DOY3 106 aa12.49□□□□□ -0.41
SHTN1-204ENST00000392903 RAC2P15153 192 aa12.49□□□□□ -0.41
SHTN1-204ENST00000392903 HOXC12P31275 282 aa12.49□□□□□ -0.41
SHTN1-204ENST00000392903 FABP6P51161 128 aa12.49□□□□□ -0.41
SHTN1-204ENST00000392903 INO80CQ6PI98 192 aaPredicted RBP12.49□□□□□ -0.41
SHTN1-204ENST00000392903 PTPRZ1P23471 2315 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms