RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 HLA-DMAP28067 261 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 RCVRNP35243 200 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 MAS1LP35410 378 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 INSL3P51460 131 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 SLURP1P55000 103 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 HERV-K104P61576 105 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 DGCR2P98153 550 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 C10orf55Q5SWW7 151 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 ZNF343Q6P1L6 599 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 TMEM17Q86X19 198 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 SNX29P2Q8IUI4 249 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 BORCS5Q969J3 196 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 USMG5Q96IX5 58 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 ABHD1Q96SE0 405 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 SPIN2AQ99865 258 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 SPIN2BQ9BPZ2 258 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 ZNF2Q9BSG1 426 aaPredicted RBP8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 FXYD6Q9H0Q3 95 aa8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 ZMAT5Q9UDW3 170 aaKnown RBP8.76□□□□□ -1.01
IGHV4-28-201ENST00000390612 HUWE1Q7Z6Z7 4374 aaKnown RBP8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 CGB1A6NKQ9 187 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 HPRT1P00492 218 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 APELAP0DMC3 54 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 RPL5P46777 297 aaKnown RBP8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 TMBIM6P55061 237 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 UCP3P55916 312 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 TAS2R31P59538 309 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 ZNF45Q02386 682 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 CATR1Q13166 79 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 ZNF585BQ52M93 769 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 VAX1Q5SQQ9 334 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 OR4A47Q6IF82 309 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 ACSM6Q6P461 480 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 CLVS1Q8IUQ0 354 aaPredicted RBP8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 OR6F1Q8NGZ6 308 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 OR4A5Q8NH83 315 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 DYNC2LI1Q8TCX1 351 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 CD300LFQ8TDQ1 290 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 RAB2BQ8WUD1 216 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 AIFM2Q9BRQ8 373 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 PLEKHA2Q9HB19 425 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 ZNF355PQ9NSJ1 428 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 MTFP1Q9UDX5 166 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 STAB2Q8WWQ8 2551 aa8.75□□□□□ -1.01
IGHV4-28-201ENST00000390612 C13orf42A0A1B0GVH6 325 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 HMX3A6NHT5 357 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 NPIPB5A8MRT5 1133 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 UPK2O00526 184 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 CTDSP2O14595 271 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 ACTL6BO94805 426 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 CRYGCP07315 174 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 NQO2P16083 231 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 F2RP25116 425 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 RPL27AP46776 148 aaKnown RBP8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 RPL8P62917 257 aaKnown RBP8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 KLF5Q13887 457 aaPredicted RBP8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 AADACL3Q5VUY0 350 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 ZNF429Q86V71 674 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 OR51H1Q8NH63 302 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 OR52I2Q8NH67 350 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 PHB2Q99623 299 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 RSRP1Q9BUV0 290 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 RANGRFQ9HD47 186 aaPredicted RBP8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 SLC2A9Q9NRM0 540 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 FAM212BQ9NTI7 297 aaPredicted RBP8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 COA4Q9NYJ1 87 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 COMMD9Q9P000 198 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 EXTL2Q9UBQ6 330 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 KLK11Q9UBX7 282 aa8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 LSM4Q9Y4Z0 139 aaKnown RBP8.74□□□□□ -1.01
IGHV4-28-201ENST00000390612 TRAV3A0A0B4J244 114 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 FAM223BA6NKX1 122 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 FAM25AB3EWG3 89 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 FAM25CB3EWG5 89 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 FAM25GB3EWG6 89 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 GPR31O00270 319 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 S1PR2O95136 353 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 MYOD1P15172 320 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 CTRB1P17538 263 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 HLA-GP17693 338 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 RHOGP84095 191 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 DEFA5Q01523 94 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 CTRB2Q6GPI1 263 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 SSX9Q7RTT3 188 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 SLC25A42Q86VD7 318 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 LHFPL1Q86WI0 220 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 FAM223AQ8IWN6 122 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 C15orf40Q8WUR7 153 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 DGCR14Q96DF8 476 aaKnown RBP8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 FANCD2OSQ96PS1 177 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 AKIP1Q9NQ31 210 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 CCDC59Q9P031 241 aaKnown RBP8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 PEF1Q9UBV8 284 aaKnown RBP8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 ZNF257Q9Y2Q1 563 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 DMRT1Q9Y5R6 373 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 TENM3Q9P273 2699 aa8.73□□□□□ -1.01
IGHV4-28-201ENST00000390612 TRBV12-3P01733 135 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 PRH1P02810 166 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 CD74P04233 296 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 RLN1P04808 185 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms