RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 PCYT1BQ9Y5K3 369 aaPredicted RBP4.58□□□□□ -1.68
TRAV35-201ENST00000390462 DYSFO75923 2080 aa4.58□□□□□ -1.68
TRAV35-201ENST00000390462 LAMA4Q16363 1823 aa4.58□□□□□ -1.68
TRAV35-201ENST00000390462 LOC102724200A0A096LPH7 203 aaPredicted RBP4.57□□□□□ -1.68
TRAV35-201ENST00000390462 PRORSD1PA6NEY8 169 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 ZNF850A8MQ14 1090 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 INMT-MINDY4F8WBC2 141 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 SLC25A14O95258 325 aaPredicted RBP4.57□□□□□ -1.68
TRAV35-201ENST00000390462 ZNF286BP0CG31 522 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 INPP1P49441 399 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 PSMB3P49720 205 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 ZNF136P52737 540 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 CCDC153Q494R4 210 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 BRMS1LQ5PSV4 323 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 NANOGP8Q6NSW7 305 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 SBSNQ6UWP8 590 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 FA2HQ7L5A8 372 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 CEND1Q8N111 149 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 C14orf178Q8N769 122 aaPredicted RBP4.57□□□□□ -1.68
TRAV35-201ENST00000390462 LINC01555Q8NAE3 123 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 ZNF555Q8NEP9 628 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 FAM57AQ8TBR7 257 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 C11orf40Q8WZ69 217 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 APOBEC3DQ96AK3 386 aaPredicted RBP4.57□□□□□ -1.68
TRAV35-201ENST00000390462 SOSTQ9BQB4 213 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 FGF23Q9GZV9 251 aaPredicted RBP4.57□□□□□ -1.68
TRAV35-201ENST00000390462 OR52D1Q9H346 318 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 CDC42EP4Q9H3Q1 356 aaKnown RBP4.57□□□□□ -1.68
TRAV35-201ENST00000390462 NANOGQ9H9S0 305 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 PLSCR3Q9NRY6 295 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 CA10Q9NS85 328 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 PXMP4Q9Y6I8 212 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 SPAG17Q6Q759 2223 aa4.57□□□□□ -1.68
TRAV35-201ENST00000390462 DMXL2Q8TDJ6 3036 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 IGLV1-50A0A075B6I6 118 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 IGHV1OR15-9A0A0B4J2B8 117 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 IGHV3-66A0A0C4DH42 116 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 NDUFAF8A1L188 74 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 TMEM150BA6NC51 233 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 C9JQL5 133 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 KPNA4O00629 521 aaPredicted RBP4.56□□□□□ -1.68
TRAV35-201ENST00000390462 MFSD11O43934 449 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 MT-CO2P00403 227 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 C1GALT1C1LP0DN25 315 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 HSPA9P38646 679 aaKnown RBP4.56□□□□□ -1.68
TRAV35-201ENST00000390462 UBE2AP49459 152 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 LYZP61626 148 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 PSPHP78330 225 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 MRPS21P82921 87 aaKnown RBP4.56□□□□□ -1.68
TRAV35-201ENST00000390462 ATAD3CQ5T2N8 411 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 SLC16A13Q7RTY0 426 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 MARCH3Q86UD3 253 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 ZBTB8OSQ8IWT0 167 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 EIF4E3Q8N5X7 224 aaKnown RBP4.56□□□□□ -1.68
TRAV35-201ENST00000390462 DCAF4L2Q8NA75 395 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 LY6G5BQ8NDX9 201 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 GRPEL2Q8TAA5 225 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 C15orf40Q8WUR7 153 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 SKA2Q8WVK7 121 aaPredicted RBP4.56□□□□□ -1.68
TRAV35-201ENST00000390462 C12orf43Q96C57 262 aaKnown RBP4.56□□□□□ -1.68
TRAV35-201ENST00000390462 GPER1Q99527 375 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 CGREF1Q99674 301 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 GTSF1LQ9H1H1 148 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 NOX3Q9HBY0 568 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 OR52A1Q9UKL2 312 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 FIS1Q9Y3D6 152 aa4.56□□□□□ -1.68
TRAV35-201ENST00000390462 TENM4Q6N022 2769 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 DOCK6Q96HP0 2047 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 IGSF23A1L1A6 192 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 OR5H1A6NKK0 313 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 MRASO14807 208 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 EIF1BO60739 113 aaKnown RBP4.55□□□□□ -1.68
TRAV35-201ENST00000390462 ZNF432O94892 652 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 ORM2P19652 201 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 EIF1P41567 113 aaKnown RBP4.55□□□□□ -1.68
TRAV35-201ENST00000390462 CRISP3P54108 245 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 SNRPD2P62316 118 aaKnown RBP4.55□□□□□ -1.68
TRAV35-201ENST00000390462 HERVK_113P63121 156 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 IL15RAQ13261 267 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 TMEM78Q5T7P6 136 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 GOLT1AQ6ZVE7 132 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 ZNF440Q8IYI8 595 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 POM121L12Q8N7R1 296 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 YIPF7Q8N8F6 280 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 SLC25A29Q8N8R3 303 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 SUMF2Q8NBJ7 301 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 OR2M3Q8NG83 312 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 OR8B12Q8NGG6 310 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 GNPDA2Q8TDQ7 276 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 GALMQ96C23 342 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 C16orf74Q96GX8 76 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 UQCC1Q9NVA1 299 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 GSKIPQ9P0R6 139 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 TAC3Q9UHF0 121 aa4.55□□□□□ -1.68
TRAV35-201ENST00000390462 TRAV26-2A0A0B4J265 109 aa4.54□□□□□ -1.68
TRAV35-201ENST00000390462 IGKV6D-41A0A0C4DH26 115 aa4.54□□□□□ -1.68
TRAV35-201ENST00000390462 ORC5O43913 435 aa4.54□□□□□ -1.68
TRAV35-201ENST00000390462 IGHV3-11P01762 117 aa4.54□□□□□ -1.68
TRAV35-201ENST00000390462 GIG44P09565 113 aaPredicted RBP4.54□□□□□ -1.68
TRAV35-201ENST00000390462 RNF224P0DH78 156 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms