RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 H1FOOQ8IZA3 346 aaPredicted RBP4.24□□□□□ -1.73
LTN1-202ENST00000389194 PAQR4Q8N4S7 273 aaPredicted RBP4.24□□□□□ -1.73
LTN1-202ENST00000389194 OR8B3Q8NGG8 313 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 ZNF714Q96N38 554 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 OR8B2Q96RD0 313 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 PMCHL2Q9BQD1 86 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 TMEM167BQ9NRX6 74 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 DEPPQ9NTK1 212 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 CALYQ9NYX4 217 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 KCNMB2Q9Y691 235 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 TEX50A0A1B0GTY4 177 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 F8VVB4 439 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 F8VWA3 439 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 TCTEX1D1Q8N7M0 179 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 OR10S1Q8NGN2 331 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 RAB1CQ92928 201 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 ANAPC16Q96DE5 110 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 MRPL18Q9H0U6 180 aaKnown RBP4.24□□□□□ -1.73
LTN1-202ENST00000389194 PITPNC1Q9UKF7 332 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 LOC105371267A0A1B0GV96 52 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 LYPD3O95274 346 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 CGAP01215 116 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 DANCRP0C864 163 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 SMIM6P0DI80 62 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 TM4SF20Q53R12 229 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 SCGB1D4Q6XE38 83 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 OR13A1Q8NGR1 328 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 FAM131CQ96AQ9 280 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 RCC1LQ96I51 464 aaKnown RBP4.24□□□□□ -1.73
LTN1-202ENST00000389194 C14orf144Q96I85 54 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 TRPM7Q96QT4 1865 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 CISD1Q9NZ45 108 aaKnown RBP4.24□□□□□ -1.73
LTN1-202ENST00000389194 UMODP07911 640 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 KCNMB1Q16558 191 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 CRIPAKQ8N1N5 446 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 GGACTQ9BVM4 153 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 RSPO3Q9BXY4 272 aaPredicted RBP4.24□□□□□ -1.73
LTN1-202ENST00000389194 GSX1Q9H4S2 264 aaPredicted RBP4.24□□□□□ -1.73
LTN1-202ENST00000389194 BET1LQ9NYM9 111 aa4.24□□□□□ -1.73
LTN1-202ENST00000389194 GBF1Q92538 1859 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 C1QTNF9BB2RNN3 333 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 C12orf77C9JDV5 145 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 CD74P04233 296 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 DNASE2BQ8WZ79 361 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 ZNF107Q9UII5 783 aaPredicted RBP4.23□□□□□ -1.73
LTN1-202ENST00000389194 AUP1Q9Y679 476 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 HPRT1P00492 218 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 AGAP20933 346 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 GFI1BQ5VTD9 330 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 C18orf15Q96N68 181 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 VSIRQ9H7M9 311 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 PRNDQ9UKY0 176 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 SCO2A0A1W2PP80 73 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 SYNGR3O43761 229 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 PDE6DO43924 150 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 CD82P27701 267 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 SPATA45Q537H7 98 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 ZNF502Q8TBZ5 544 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 TANC2Q9HCD6 1990 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 MALRD1Q5VYJ5 2156 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 LILRA1O75019 489 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 AMY1AP04745 511 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 CCL3L1P16619 93 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 IGFBP2P18065 325 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 PSG7Q13046 419 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 TMEM177Q53S58 311 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 MBNL2Q5VZF2 373 aaKnown RBP4.23□□□□□ -1.73
LTN1-202ENST00000389194 OR1P1Q8NH06 330 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 ASCL2Q99929 193 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 IL19Q9UHD0 177 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 TCF19Q9Y242 345 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 LINC00587B1AMM8 73 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 MGST3O14880 152 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 CECR9P0C854 216 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 RPL27AP46776 148 aaKnown RBP4.23□□□□□ -1.73
LTN1-202ENST00000389194 RPL8P62917 257 aaKnown RBP4.23□□□□□ -1.73
LTN1-202ENST00000389194 IGLV3-21P80748 117 aaPredicted RBP4.23□□□□□ -1.73
LTN1-202ENST00000389194 EFNB1P98172 346 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 LINC00114Q6XXX2 140 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 GBGT1Q8N5D6 347 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 PLPPR1Q8TBJ4 325 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 MAP1LC3CQ9BXW4 147 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 CUL9Q8IWT3 2517 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 A1L4Q6 167 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 CA1P00915 261 aaPredicted RBP4.23□□□□□ -1.73
LTN1-202ENST00000389194 CD1AP06126 327 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 KIR2DS2P43631 304 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 PKIAP61925 76 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 SPANXN1Q5VSR9 72 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 GOLT1AQ6ZVE7 132 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 STPG3Q8N7X2 389 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 Q8WTZ3 238 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 WFDC12Q8WWY7 111 aa4.23□□□□□ -1.73
LTN1-202ENST00000389194 SRSF12Q8WXF0 261 aaKnown RBP4.23□□□□□ -1.73
LTN1-202ENST00000389194 CACNA1AO00555 2505 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 hCG_38984A0A1B0GV85 526 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 ZNF716A6NP11 495 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 HYPMO75409 117 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 CA2P00918 260 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 ZNF600Q6ZNG1 722 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms